Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NDUFS2	Gene	0	222.24	129.23	181.13	68.88	444.26	83.46	266.24
2	367993	Transcript	0	3.89	1.69	3.70	1.89	1.78	6.77	0.54
3	392179	Transcript	0	0	0	0	0	0	0	0
4	ER1a	ExonRegion	0	0.84	1.33	2.18	1.37	1.75	2.18	0.00
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.73	0.00	0.00	1.02	0.00
6	ER2a	ExonRegion	1	10.84	3.75	8.18	4.29	3.59	17.10	1.61
7	E2_Ab	KnownBoundary	0	29.12	4.07	20.94	3.49	15.86	18.73	8.66
8	ER2b	ExonRegion	0	180.29	70.13	139.34	38.18	429.24	48.55	166.96
9	E2a_E3a	KnownJunction	0	29.21	31.58	30.72	8.61	48.18	17.98	37.18
10	E2a_E4a	NovelJunction	0	2.05	3.10	3.94	4.93	2.05	11.15	1.36
11	ER3a	ExonRegion	0	180.25	125.11	148.14	51.61	133.10	57.60	180.68
12	E3a_E4a	KnownJunction	0	574.87	178.36	438.55	85.91	350.91	83.00	466.65
13	ER4a	ExonRegion	0	322.80	189.26	289.08	86.53	628.88	96.72	391.81
14	E4a_E5a	KnownJunction	0	299.77	196.17	286.29	93.74	506.79	105.40	395.58
15	ER5a	ExonRegion	0	312.51	199.14	293.12	105.30	663.01	119.27	510.46
16	E5a_E6a	KnownJunction	0	341.11	191.83	305.28	102.05	607.72	131.48	515.07
17	ER6a	ExonRegion	0	315.19	207.58	269.15	111.08	633.47	117.93	460.02
18	E6a_E7a	KnownJunction	0	292.79	219.45	258.36	99.07	617.19	126.95	424.47
19	E7_Aa	NovelBoundary	1	109.74	2.73	96.02	1.22	10.88	0.00	3.51
20	ER7a	ExonRegion	0	343.23	206.80	326.54	110.08	916.76	122.45	536.44
21	E7a_E8a	KnownJunction	0	385.35	187.32	338.65	82.74	773.08	77.53	450.45
22	E7a_E9a	NovelJunction	0	1.02	4.41	3.62	11.30	9.43	1.05	11.55
23	ER8a	ExonRegion	0	366.24	201.40	292.58	100.32	754.52	123.79	428.01
24	E8a_E9a	KnownJunction	0	338.57	185.58	275.85	109.07	769.87	140.91	419.01
25	ER9a	ExonRegion	0	323.61	222.90	290.95	108.51	700.38	132.32	456.21
26	E9a_E10a	KnownJunction	0	337.87	229.30	320.03	92.03	720.63	130.43	455.27
27	ER10a	ExonRegion	0	289.20	195.01	258.03	111.79	749.85	123.61	402.51
28	E10a_E11a	KnownJunction	0	279.96	169.21	226.66	87.48	720.70	114.84	405.36
29	E10a_E12a	NovelJunction	0	3.62	5.31	3.72	11.46	0.00	8.52	0.83
30	ER11a	ExonRegion	0	273.35	167.17	225.72	99.75	731.64	119.53	365.39
31	E11a_E12a	KnownJunction	0	310.03	173.86	222.70	106.85	709.45	116.77	353.53
32	ER12a	ExonRegion	0	312.72	186.08	248.54	105.46	612.44	141.21	343.07
33	E12a_E13a	KnownJunction	0	312.97	190.94	248.03	119.17	531.97	152.60	348.31
34	ER13a	ExonRegion	0	294.90	186.55	224.77	117.14	514.39	127.18	340.84
35	E13a_E14a	KnownJunction	0	285.78	136.40	214.59	97.72	520.72	117.14	272.21
36	ER14a	ExonRegion	0	283.79	146.29	204.69	97.07	666.02	112.54	286.53
37	E14_Da	NovelBoundary	1	95.75	11.51	77.07	7.83	11.13	19.99	6.11
38	E14a_E15a	KnownJunction	0	252.39	132.12	168.52	79.32	690.23	91.36	263.88
39	I14	Intron	1	8.31	9.41	7.67	4.04	4.56	19.07	3.28
40	I14_AR1	ActiveIntronRegion	1	8.37	9.48	7.73	4.07	4.59	19.20	3.31
41	ER15a	ExonRegion	1	229.55	87.33	121.59	44.75	261.51	72.16	130.97