Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	UAP1	Gene	0	563.69	607.93	405.31	389.33	132.26	1754.26	665.93
2	367926	Transcript	1	64.44	76.71	34.68	61.69	38.89	523.00	25.94
3	271469	Transcript	0	0	0	0	0	0	0	0
4	367924	Transcript	1	61.44	117.09	53.53	96.20	23.17	243.53	175.56
5	367925	Transcript	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	63.58	111.57	50.10	62.77	13.19	226.96	111.07
7	E1a_E2a	KnownJunction	0	464.20	677.28	385.74	410.21	57.33	1823.51	821.71
8	E2_Ab	NovelBoundary	0	245.94	371.01	237.71	231.09	63.46	1078.56	353.11
9	ER2a	ExonRegion	0	398.88	601.68	337.55	360.52	63.70	1570.50	683.41
10	ER2b	ExonRegion	0	617.23	746.61	423.36	449.85	128.34	1878.40	588.89
11	E2a_E3a	KnownJunction	0	1059.76	1003.67	640.99	590.80	174.83	2581.43	677.59
12	ER3a	ExonRegion	0	847.76	812.62	557.74	501.61	176.28	2150.51	770.90
13	E3a_E4a	KnownJunction	0	497.76	730.08	460.89	441.53	113.35	1962.95	716.71
14	ER4a	ExonRegion	0	570.77	734.35	509.45	460.37	127.38	2041.19	739.55
15	E4a_E5a	KnownJunction	0	512.98	706.49	531.07	474.96	145.30	2025.61	716.08
16	E5_Aa	NovelBoundary	1	181.47	7.01	203.66	7.29	0.00	8.50	3.64
17	ER5a	ExonRegion	0	813.43	804.59	593.43	493.24	181.74	2260.08	882.84
18	E5a_E6a	KnownJunction	0	991.38	778.87	619.25	511.02	229.17	2180.43	867.77
19	ER6a	ExonRegion	0	1087.44	890.69	684.36	554.16	226.60	2422.18	1007.67
20	E6a_E7a	KnownJunction	0	834.61	652.45	538.10	411.62	232.19	1805.47	873.97
21	ER7a	ExonRegion	0	670.07	646.19	484.22	390.40	201.75	1773.43	861.73
22	E7a_E8a	KnownJunction	0	562.40	576.82	522.45	372.42	169.02	1843.85	998.04
23	ER8a	ExonRegion	0	501.99	703.25	414.02	449.28	163.98	1941.86	928.94
24	E8a_E9a	KnownJunction	0	249.11	452.00	231.78	259.97	95.30	984.14	508.74
25	E8a_E9b	KnownJunction	1	61.44	117.09	53.53	96.20	23.17	243.53	175.56
26	E8a_E10a	KnownJunction	1	64.44	76.71	34.68	61.69	38.89	523.00	25.94
27	E9_Ab	NovelBoundary	1	117.46	9.20	108.05	3.33	3.30	13.72	0.00
28	ER9a	ExonRegion	0	314.10	544.56	274.68	319.53	103.86	1151.21	634.12
29	ER9b	ExonRegion	0	390.32	658.71	336.63	427.18	145.74	1536.38	887.35
30	E9a_E10a	KnownJunction	0	383.60	579.21	306.23	379.87	157.06	1518.31	839.26
31	ER10a	ExonRegion	0	447.80	713.12	346.66	462.60	166.09	2143.28	900.23
32	E10a_E11a	KnownJunction	0	397.74	687.00	298.95	451.53	135.27	2012.85	739.07
33	ER11a	ExonRegion	0	424.76	422.32	305.07	318.75	95.14	1662.19	525.21
34	ER11b	ExonRegion	0	39.34	24.05	16.93	21.45	11.82	77.73	27.93
35	IG4	Intergenic	0	9.79	5.29	7.43	7.28	0.29	21.49	4.77
36	IG4_SR1	SilentIntergenicRegion	0	18.05	10.80	9.80	6.37	3.82	29.20	12.03
37	IG4_AR2	ActiveIntergenicRegion	0	6.89	3.17	9.22	2.97	1.21	13.64	6.41
38	IG4_AR3	ActiveIntergenicRegion	0	11.31	3.46	12.73	5.32	0.58	9.32	5.74
39	IG4_SR3	SilentIntergenicRegion	0	14.51	4.56	11.17	6.76	0.43	20.66	5.49
40	IG4_AR4	ActiveIntergenicRegion	0	7.47	1.21	2.71	5.21	0.00	13.49	1.72
41	IG4_AR5	ActiveIntergenicRegion	0	8.45	5.59	5.60	8.81	0.00	26.73	2.92
42	IG4_AR6	ActiveIntergenicRegion	0	13.30	9.31	11.07	16.67	0.00	40.29	10.22
43	IG4_SR4	SilentIntergenicRegion	0	9.14	5.92	6.60	8.02	0.17	23.63	4.56
44	IG4_AR7	ActiveIntergenicRegion	0	1.55	2.91	2.15	1.39	0.00	16.27	2.11