Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SMG5	Gene	0	172.76	262.42	305.23	254.11	267.42	137.86	207.11
2	368267	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	361813	Transcript	0	179.66	260.48	313.29	254.31	273.49	124.41	225.54
4	ER1a	ExonRegion	0	35.97	73.01	51.88	56.88	33.62	30.88	27.01
5	E1a_E2a	KnownJunction	0	212.26	221.94	293.34	208.55	160.31	113.63	141.32
6	ER2a	ExonRegion	0	267.94	294.95	391.88	278.14	284.57	168.26	198.70
7	E2a_E3a	KnownJunction	0	196.69	347.91	351.53	324.31	383.71	224.21	221.22
8	ER3a	ExonRegion	0	302.50	358.26	493.66	338.76	365.23	209.57	277.73
9	E3a_E4a	KnownJunction	0	346.03	405.18	581.25	331.16	483.69	219.81	307.64
10	ER4a	ExonRegion	0	283.22	380.06	510.70	346.85	433.01	197.99	311.18
11	E4a_E5a	KnownJunction	0	229.95	339.43	451.20	329.18	306.00	222.33	274.88
12	E4a_E6a	NovelJunction	0	0.00	11.01	1.87	11.92	2.17	1.13	0.80
13	E5_Aa	NovelBoundary	0	92.86	128.91	170.12	119.50	77.67	93.32	93.17
14	ER5a	ExonRegion	0	235.24	309.90	469.34	297.47	426.30	162.44	294.24
15	E5a_E6a	KnownJunction	0	204.57	270.81	404.61	227.02	454.60	134.00	270.81
16	I5_SR1	SilentIntronRegion	0	34.65	9.26	32.87	8.41	10.73	5.67	5.99
17	ER6a	ExonRegion	0	208.02	261.60	431.89	229.77	363.88	133.77	252.71
18	E6a_E7a	KnownJunction	0	169.09	249.92	361.41	201.64	323.62	142.17	244.45
19	E6a_E8a	NovelJunction	0	13.24	29.98	24.44	35.57	9.64	16.11	10.36
20	ER7a	ExonRegion	0	176.83	272.68	411.90	205.21	330.26	118.13	239.03
21	E7a_E8a	KnownJunction	0	176.81	306.35	424.10	219.49	349.11	126.82	228.54
22	ER8a	ExonRegion	0	229.51	323.59	494.50	278.08	377.67	172.95	287.21
23	E8a_E9a	KnownJunction	0	269.69	343.00	543.56	344.27	359.53	186.71	352.57
24	ER9a	ExonRegion	0	275.92	406.63	553.38	336.72	457.38	172.65	327.95
25	E9a_E10a	KnownJunction	0	244.09	363.96	499.28	307.59	436.53	178.57	264.54
26	E9a_E22b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER10a	ExonRegion	0	225.21	349.24	446.42	309.96	385.16	154.09	303.99
28	E10a_E11a	KnownJunction	0	192.85	318.62	376.17	259.34	429.34	156.70	278.20
29	E10a_E12a	NovelJunction	0	15.59	27.82	24.72	40.85	11.32	24.66	35.37
30	ER11a	ExonRegion	0	182.30	305.72	375.28	272.10	332.26	114.85	232.46
31	E11a_E12a	KnownJunction	0	136.21	276.93	318.48	224.72	204.55	92.86	170.93
32	ER12a	ExonRegion	0	166.90	284.80	335.64	266.87	256.50	129.71	217.10
33	E12a_E13a	KnownJunction	0	200.58	257.99	272.42	245.69	208.63	111.54	185.06
34	E13_Aa	NovelBoundary	1	67.73	2.81	86.45	1.03	0.00	9.54	3.41
35	ER13a	ExonRegion	0	254.16	303.08	398.69	321.02	364.75	147.48	303.85
36	E13a_E14a	KnownJunction	0	252.40	335.85	375.04	342.51	198.28	175.11	354.93
37	ER14a	ExonRegion	0	209.57	317.19	305.21	311.20	250.14	155.67	305.80
38	E14a_E15a	KnownJunction	0	283.91	259.04	377.06	269.15	324.58	113.10	294.14
39	ER15a	ExonRegion	0	227.53	249.06	345.40	273.74	382.27	124.18	301.54
40	E15a_E16a	KnownJunction	0	119.70	228.27	234.67	216.11	276.70	88.81	216.18
41	ER16a	ExonRegion	0	151.18	263.33	247.48	271.28	266.49	114.92	250.06
42	E16a_E17a	KnownJunction	0	131.43	271.94	230.93	246.94	220.98	105.81	208.54
43	ER17a	ExonRegion	0	130.70	263.91	270.00	260.91	225.79	101.96	234.60
44	E17a_E18a	KnownJunction	0	128.06	238.28	277.66	280.75	219.65	121.22	238.92
45	ER18a	ExonRegion	0	129.50	247.22	253.69	262.07	223.10	117.39	209.23
46	E18a_E19a	KnownJunction	0	126.06	211.49	251.52	225.51	260.38	117.62	180.06
47	ER19a	ExonRegion	0	187.46	212.11	332.79	208.42	260.72	100.26	170.15
48	E19a_E20a	KnownJunction	0	268.47	215.14	398.42	234.39	302.06	116.39	175.17
49	ER20a	ExonRegion	0	192.21	219.24	347.55	228.14	291.75	108.07	184.10
50	E20_Da	NovelBoundary	1	71.80	41.82	86.98	38.79	15.21	34.84	16.61
51	E20a_E21a	KnownJunction	0	109.89	173.44	263.06	167.67	231.84	78.66	148.27
52	I20	Intron	0	48.26	38.30	55.50	31.23	7.10	22.92	13.09
53	I20_AR1	ActiveIntronRegion	0	48.47	38.47	55.76	31.37	7.13	23.03	13.15
54	ER21a	ExonRegion	0	189.26	214.18	311.96	196.30	255.69	107.28	203.45
55	E21a_E22a	KnownJunction	0	176.43	211.30	236.48	203.56	197.03	134.27	192.63
56	ER22a	ExonRegion	0	146.25	237.00	230.43	230.92	229.20	135.72	164.16
57	E22_Ab	KnownBoundary	0	175.63	282.71	216.98	251.73	266.51	150.27	165.31
58	ER22b	ExonRegion	0	164.27	277.69	223.34	285.10	226.33	183.31	174.73
59	E22_Da	KnownBoundary	0	171.81	249.08	222.17	277.25	265.80	181.73	179.23
60	ER22c	ExonRegion	0	88.41	204.51	147.03	229.60	149.89	156.84	101.55
61	IG34	Intergenic	0	6.15	5.87	4.97	6.48	9.89	3.50	18.53
62	IG34_SR2	SilentIntergenicRegion	0	5.17	4.03	4.12	6.23	8.39	3.77	17.01
63	IG34_AR1	ActiveIntergenicRegion	0	7.80	8.10	6.33	7.68	12.02	3.88	22.51