Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ARNT	Gene	0	58.20	49.76	105.96	60.31	93.88	167.18	71.11
2	368975	Transcript	0	0.00	0.00	0.00	0.81	0.00	0.83	0.00
3	342710	Transcript	0	0.00	0.48	0.81	0.00	0.36	0.00	0.91
4	358595	Transcript	0	0	0	0	0	0	0	0
5	354396	Transcript	0	8.83	19.20	6.83	6.18	96.66	27.34	2.85
6	322733	Transcript	0	1.37	2.31	3.25	2.85	2.17	5.82	3.45
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.82	0.00
9	ER1c	ExonRegion	0	0.78	1.88	1.38	1.93	1.26	5.49	0.52
10	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	2.73	0.00
11	E1a_E1d	KnownJunction	0	0.00	0.00	0.79	0.00	0.00	1.45	0.00
12	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	1.31	0.00
13	ER1d	ExonRegion	0	0.00	0.73	0.00	0.00	0.00	4.17	0.00
14	ER1e	ExonRegion	1	41.66	14.82	36.43	21.38	38.46	50.19	19.46
15	E1b_E2a	KnownJunction	0	0.00	0.00	2.67	1.68	1.18	1.66	0.80
16	E1b_E3a	KnownJunction	1	101.71	31.11	88.89	46.24	93.85	107.55	47.55
17	ER2a	ExonRegion	0	0.00	0.00	1.38	1.89	1.88	0.88	0.57
18	E2a_E3a	KnownJunction	0	0.67	0.00	0.00	1.68	0.00	0.00	0.86
19	ER3a	ExonRegion	0	40.22	32.92	45.35	44.08	28.67	115.27	29.84
20	E3a_E4a	KnownJunction	0	23.70	45.03	50.25	56.43	21.25	158.44	35.53
21	ER4a	ExonRegion	0	103.84	63.04	112.73	65.09	49.15	187.77	67.74
22	E4a_E5a	KnownJunction	1	136.16	59.77	115.37	50.82	109.52	146.86	68.03
23	ER5a	ExonRegion	0	97.57	68.44	118.18	54.37	145.59	192.84	74.51
24	E5a_E6a	KnownJunction	0	20.36	39.41	56.30	30.88	63.40	146.89	39.76
25	E5a_E7a	KnownJunction	1	8.83	19.20	6.83	6.18	96.66	27.34	2.85
26	ER6a	ExonRegion	0	38.32	50.32	91.73	72.05	59.73	213.68	58.03
27	E6a_E7a	KnownJunction	0	44.88	37.52	90.83	78.46	54.40	203.12	59.22
28	ER7a	ExonRegion	0	67.67	79.78	136.43	90.15	105.42	243.74	96.55
29	E7a_E8a	KnownJunction	0	53.37	68.15	134.12	80.68	103.37	230.26	102.47
30	ER8a	ExonRegion	0	59.39	92.77	140.49	87.81	126.62	231.16	101.94
31	E8a_E9a	KnownJunction	0	68.43	87.30	143.01	90.84	132.53	194.24	101.87
32	ER9a	ExonRegion	0	86.27	115.36	179.57	118.73	143.29	270.15	133.69
33	E9a_E10a	KnownJunction	0	85.70	113.76	156.56	126.95	124.85	306.83	122.32
34	ER10a	ExonRegion	0	88.63	104.92	173.55	115.40	131.86	310.05	114.93
35	E10a_E11a	KnownJunction	0	93.45	93.92	186.54	102.51	144.59	296.14	99.16
36	ER11a	ExonRegion	0	90.79	96.31	168.64	112.65	134.69	284.52	120.22
37	E11a_E12a	KnownJunction	0	61.00	57.53	105.44	69.54	116.07	220.29	96.84
38	E11a_E12b	KnownJunction	0	6.18	11.53	11.40	8.99	7.81	25.11	15.03
39	E12_Ab	NovelBoundary	0	46.28	39.43	77.71	38.88	72.20	123.95	62.99
40	E12a_E23b	KnownJunction	0	0.00	0.00	0.00	1.63	0.00	1.66	0.00
41	ER12a	ExonRegion	0	62.68	63.78	112.02	72.48	123.00	222.14	102.12
42	ER12b	ExonRegion	0	69.23	78.19	138.49	78.67	128.47	240.63	118.12
43	ER12c	ExonRegion	0	68.76	78.63	157.29	85.47	117.01	229.60	105.90
44	E12b_E14a	KnownJunction	0	72.87	91.63	167.39	95.79	122.83	246.29	93.86
45	E12c_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER12d	ExonRegion	0	0.00	0.00	0.00	0.00	1.42	0.00	1.35
47	E13a_E14b	KnownJunction	0	0.00	0.00	2.41	0.00	0.00	0.00	0.00
48	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.40	0.00	0.51
49	E14_Ab	NovelBoundary	0	45.58	55.04	103.71	52.99	53.67	137.40	55.72
50	ER14a	ExonRegion	0	72.75	94.22	181.54	104.05	117.61	244.65	101.11
51	ER14b	ExonRegion	0	52.35	90.72	145.03	104.84	106.39	234.95	95.96
52	E14a_E15a	KnownJunction	0	44.63	76.53	137.48	75.99	88.25	247.66	92.91
53	ER15a	ExonRegion	0	69.74	105.40	177.84	103.51	127.55	274.49	117.78
54	E15a_E16a	KnownJunction	0	74.42	84.23	177.66	123.35	132.74	292.60	122.29
55	ER16a	ExonRegion	0	80.57	99.15	177.92	119.85	143.41	302.41	132.77
56	E16a_E17a	KnownJunction	0	80.93	94.84	162.23	118.55	155.51	293.78	156.03
57	E16a_E18a	NovelJunction	0	3.34	10.77	12.13	12.71	20.08	32.86	5.10
58	ER17a	ExonRegion	0	88.53	90.44	169.02	109.58	143.88	314.76	126.99
59	E17a_E18a	KnownJunction	0	76.26	85.20	151.75	77.91	171.10	233.83	106.47
60	ER18a	ExonRegion	0	91.91	87.20	190.94	91.10	187.23	285.12	157.49
61	E18a_E19a	KnownJunction	0	101.34	111.86	203.69	121.10	153.60	358.96	179.27
62	ER19a	ExonRegion	0	91.06	87.00	170.80	109.72	139.41	280.61	135.24
63	E19a_E20a	KnownJunction	0	118.30	83.88	220.69	103.79	145.30	311.73	150.74
64	ER20a	ExonRegion	0	73.70	82.08	148.54	103.78	144.59	293.07	133.46
65	E20a_E21a	KnownJunction	0	51.47	50.70	78.29	47.36	62.54	143.73	67.06
66	E20a_E21b	KnownJunction	0	0.00	2.39	1.64	0.00	0.00	0.00	2.71
67	ER21a	ExonRegion	0	58.18	59.70	94.45	49.34	66.06	163.76	81.91
68	ER21b	ExonRegion	0	31.51	61.41	60.34	56.39	64.29	171.13	59.74
69	E21a_E22a	KnownJunction	0	21.75	26.40	40.34	38.25	57.33	102.78	52.83
70	ER22a	ExonRegion	0	31.36	43.49	56.50	65.66	92.79	153.99	68.39
71	E22a_E23a	KnownJunction	0	55.71	39.93	69.93	68.54	132.46	179.69	97.37
72	ER23a	ExonRegion	0	47.25	51.13	61.12	73.17	83.97	186.33	58.63
73	E23a_E24a	KnownJunction	0	76.44	54.91	126.59	65.64	197.26	208.90	67.52
74	ER23b	ExonRegion	0	73.77	56.23	118.06	66.18	174.75	202.55	59.94
75	ER24a	ExonRegion	0	55.75	27.19	92.95	38.32	83.72	117.72	51.75
76	IG36	Intergenic	0	19.81	9.36	17.40	9.98	7.49	39.52	22.77
77	IG36_SR1	SilentIntergenicRegion	0	21.28	6.89	12.86	11.21	6.03	29.92	17.68
78	IG36_AR1	ActiveIntergenicRegion	0	19.11	10.93	20.30	9.33	8.42	45.66	26.05