Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	BCAR3	Gene	0	54.38	129.13	116.88	933.67	24.92	90.03	513.28
2	370244	Transcript	0	1.38	2.22	4.34	8.30	1.77	2.35	6.11
3	260502	Transcript	1	8.51	62.11	31.91	414.81	2.03	18.19	203.33
4	370243	Transcript	0	0.22	1.03	0.89	4.27	0.01	0.35	1.94
5	370247	Transcript	1	1.34	9.11	15.94	152.28	0.27	53.79	8.13
6	IG31_AR3	ActiveIntergenicRegion	0	4.47	1.00	16.27	8.15	3.53	8.97	1.83
7	IG31_SR2	SilentIntergenicRegion	0	5.59	1.73	11.67	9.95	2.44	4.05	2.82
8	ER1a	ExonRegion	0	0.00	1.14	0.00	0.00	0.69	0.27	0.11
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.99	1.31	0.63
10	ER2a	ExonRegion	0	1.72	4.57	4.54	5.84	6.48	6.87	5.18
11	E2a_E3a	KnownJunction	0	0.00	2.84	2.40	0.00	0.90	0.00	0.00
12	I2_AR7	ActiveIntronRegion	1	1.10	0.51	2.09	4.40	0.65	0.00	117.16
13	I2_AR8	ActiveIntronRegion	1	1.40	1.52	2.58	6.16	3.89	1.58	254.17
14	I2_AR9	ActiveIntronRegion	1	0.89	1.07	2.91	2.66	3.36	0.00	171.41
15	ER3a	ExonRegion	0	0.00	1.91	3.32	1.12	1.60	0.24	1.22
16	E3a_E6a	KnownJunction	0	0.00	1.02	4.31	1.27	0.95	0.00	5.25
17	ER4a	ExonRegion	1	2.21	31.96	9.23	205.25	0.80	8.54	71.52
18	E4a_E6a	KnownJunction	1	14.80	92.27	54.59	624.37	3.27	27.84	335.14
19	ER5a	ExonRegion	0	0.43	2.07	0.52	2.66	0.02	0.70	2.99
20	E5a_E6a	KnownJunction	0	0.00	0.00	1.25	5.88	0.00	0.00	0.89
21	ER6a	ExonRegion	0	54.38	217.65	138.10	1240.36	25.56	85.16	726.90
22	E6a_E7a	KnownJunction	0	62.09	181.54	133.59	1137.31	43.45	70.97	721.47
23	E6a_E9a	NovelJunction	0	1.45	6.12	6.35	55.73	0.00	6.22	3.04
24	E7_Aa	NovelBoundary	1	34.28	1.63	63.98	1.25	0.00	0.00	19.38
25	ER7a	ExonRegion	0	86.49	214.27	187.92	1303.95	40.96	85.97	857.96
26	E7a_E9a	KnownJunction	0	83.02	179.64	169.28	1099.38	46.29	77.13	707.38
27	E7a_E10a	NovelJunction	0	1.74	8.96	7.54	55.32	0.00	2.36	7.77
28	I7_AR5	ActiveIntronRegion	0	16.39	17.49	13.95	20.53	4.86	3.68	61.12
29	I7_AR14	ActiveIntronRegion	1	6.64	9.53	11.88	76.82	1.14	21.94	23.41
30	E8_Aa	NovelBoundary	1	12.25	14.61	19.23	158.81	2.35	39.96	32.63
31	ER8a	ExonRegion	1	1.25	8.92	12.00	107.54	0.55	41.19	10.70
32	E8a_E9a	KnownJunction	1	1.42	9.30	19.89	197.03	0.00	66.38	5.56
33	E8a_E10a	NovelJunction	1	0.00	0.00	0.00	15.98	0.00	7.96	0.00
34	I8_AR2	ActiveIntronRegion	1	19.45	7.10	5.84	14.10	0.75	2.45	42.97
35	I8_AR3	ActiveIntronRegion	1	17.13	5.03	5.13	12.47	1.50	2.10	41.92
36	I8_AR9	ActiveIntronRegion	1	15.17	6.71	9.61	7.14	0.40	0.73	23.65
37	ER9a	ExonRegion	0	65.85	224.03	143.92	1421.88	26.35	128.74	644.22
38	E9a_E10a	KnownJunction	0	61.79	212.01	151.41	1199.78	27.96	110.12	674.88
39	ER10a	ExonRegion	0	59.40	175.15	126.64	1158.46	27.08	110.85	640.27
40	E10a_E11a	KnownJunction	0	63.94	138.71	127.62	1123.85	33.15	93.42	539.61
41	I10_AR2	ActiveIntronRegion	1	14.57	7.62	3.87	6.20	0.34	0.78	14.54
42	E11_Aa	NovelBoundary	0	20.98	5.60	40.08	12.60	3.43	0.00	25.48
43	ER11a	ExonRegion	0	76.64	191.04	171.05	1418.12	36.24	142.18	745.32
44	E11a_E12a	KnownJunction	0	75.34	165.62	153.79	1288.13	15.45	112.80	695.68
45	ER12a	ExonRegion	0	66.37	181.77	146.47	1322.48	32.94	126.84	699.87
46	E12a_E13a	KnownJunction	0	51.67	174.42	109.07	1348.68	20.56	135.39	700.96
47	E12a_E14a	NovelJunction	1	2.27	3.23	7.69	69.92	0.00	11.77	1.28
48	I12_AR2	ActiveIntronRegion	1	19.09	11.49	7.79	21.73	1.41	1.32	15.81
49	ER13a	ExonRegion	0	69.05	164.26	169.71	1401.44	38.93	125.70	860.09
50	E13a_E14a	KnownJunction	0	84.87	162.75	207.13	1224.38	32.34	100.71	848.09
51	I13	Intron	1	15.26	7.45	7.49	13.86	2.17	1.44	17.85
52	I13_SR1	SilentIntronRegion	1	28.11	7.43	11.84	16.52	4.91	1.21	16.37
53	E14_Aa	NovelBoundary	0	16.57	1.16	8.72	11.73	1.06	0.00	16.72
54	ER14a	ExonRegion	0	64.84	164.73	151.37	1257.40	33.25	129.31	721.74
55	E14a_E15a	KnownJunction	0	85.19	187.63	210.53	1439.59	29.90	158.74	819.41
56	ER15a	ExonRegion	0	87.55	162.41	173.72	1320.33	47.60	132.31	721.73
57	E15a_E16a	KnownJunction	0	78.01	162.23	131.80	1401.48	34.60	123.41	691.15
58	ER16a	ExonRegion	0	88.04	148.21	152.94	1223.63	43.14	119.99	677.23
59	E16a_E17a	KnownJunction	0	78.68	99.91	144.59	1073.40	24.18	87.42	594.55
60	ER17a	ExonRegion	0	80.43	93.58	161.29	850.99	28.52	101.04	489.99
61	ER17b	ExonRegion	0	7.94	4.05	15.81	49.88	0.81	7.76	30.36
62	IG30_SR4	SilentIntergenicRegion	0	5.78	1.87	2.63	4.54	2.06	0.25	10.82
63	IG30_AR1	ActiveIntergenicRegion	0	9.86	0.70	2.24	1.83	4.71	0.00	1.42