Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CCDC18	Gene	0	23.02	18.72	14.47	13.46	56.03	18.15	11.89
2	401026	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	343253	Transcript	0	0.00	0.00	0.00	0.00	0.81	0.00	0.93
4	338949	Transcript	0	5.82	6.23	2.39	3.09	0.00	5.63	1.78
5	334652	Transcript	0	0	0	0	0	0	0	0
6	370276	Transcript	0	2.70	3.15	0.50	2.57	3.18	4.18	0.16
7	ER1a	ExonRegion	0	0.86	3.69	0.25	7.53	0.10	3.58	0.89
8	E1_Ab	KnownBoundary	1	8.48	15.05	1.44	25.44	0.95	6.54	1.46
9	ER1b	ExonRegion	0	3.46	9.66	4.50	22.85	12.19	9.44	3.60
10	E1_Da	NovelBoundary	1	6.99	21.73	5.56	39.23	2.12	12.03	3.91
11	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	2.05	0.00	0.89
12	I1	Intron	0	16.56	11.16	9.83	14.67	10.50	9.79	3.84
13	I1_AR1	ActiveIntronRegion	0	17.05	12.77	10.67	17.17	11.97	11.10	4.26
14	I1_SR1	SilentIntronRegion	0	14.22	3.22	5.69	2.31	3.22	3.36	1.81
15	E2_Aa	NovelBoundary	1	18.71	4.94	4.08	1.22	5.37	3.46	3.68
16	ER2a	ExonRegion	1	18.68	24.56	16.08	16.02	35.98	15.04	6.38
17	E2a_E3a	KnownJunction	0	23.92	23.22	14.72	19.59	69.39	19.62	5.78
18	E2a_E4a	NovelJunction	0	2.50	1.21	3.88	1.27	10.49	1.37	0.64
19	E3_Aa	NovelBoundary	1	15.45	3.26	7.27	1.63	1.18	2.52	1.59
20	ER3a	ExonRegion	1	33.49	29.63	21.05	17.85	51.37	31.25	7.89
21	E3a_E4a	KnownJunction	1	25.05	17.16	17.12	11.51	72.55	20.34	4.06
22	ER4a	ExonRegion	0	34.52	24.27	15.90	13.18	52.57	24.80	10.67
23	E4a_E5a	KnownJunction	0	19.83	21.02	9.99	14.39	45.09	21.09	6.33
24	ER5a	ExonRegion	0	16.88	15.95	13.36	13.87	50.01	22.21	9.15
25	E5a_E6a	KnownJunction	0	27.17	15.26	18.19	13.60	43.09	15.97	8.44
26	ER6a	ExonRegion	1	24.11	20.86	15.85	8.89	35.77	28.29	8.14
27	E6a_E7a	KnownJunction	1	18.13	21.60	18.06	14.03	35.43	44.49	8.11
28	ER7a	ExonRegion	1	17.90	17.32	16.32	6.00	38.62	23.17	10.14
29	E7a_E8a	KnownJunction	0	10.41	6.99	10.32	5.55	27.69	5.55	9.06
30	E7a_E9a	NovelJunction	0	10.88	9.38	4.51	9.10	10.49	21.20	2.82
31	ER8a	ExonRegion	0	22.76	8.01	15.36	6.90	43.45	7.16	8.88
32	E8a_E9a	KnownJunction	1	25.40	6.20	24.29	8.32	47.79	2.57	9.04
33	ER9a	ExonRegion	0	31.17	20.19	22.28	10.77	54.63	13.25	11.44
34	E9a_E10a	KnownJunction	1	22.01	19.20	11.60	6.85	55.65	14.50	4.51
35	ER10a	ExonRegion	0	28.64	15.41	15.45	9.71	72.87	13.00	9.76
36	E10a_E11a	KnownJunction	0	39.42	18.10	17.16	6.99	80.92	15.25	13.61
37	ER11a	ExonRegion	0	40.56	16.53	21.30	18.56	82.73	19.45	16.96
38	E11a_E12a	KnownJunction	0	35.58	14.74	22.37	12.62	78.13	2.97	11.36
39	E11a_E12b	KnownJunction	1	7.53	2.21	5.48	4.33	26.60	13.29	3.44
40	E12_Ab	NovelBoundary	1	21.41	1.58	11.14	0.00	0.00	0.00	0.00
41	ER12a	ExonRegion	0	36.88	16.40	22.86	13.40	83.62	6.74	9.95
42	ER12b	ExonRegion	0	34.71	20.96	18.54	20.87	82.58	15.10	15.48
43	E12a_E13a	KnownJunction	0	23.32	12.35	19.49	21.05	83.45	11.50	15.66
44	ER13a	ExonRegion	0	30.38	20.59	17.54	17.60	69.36	16.82	11.52
45	E13_Da	NovelBoundary	1	14.97	5.41	4.51	6.53	14.13	3.81	2.11
46	E13a_E14a	KnownJunction	1	12.47	11.24	14.26	5.74	46.34	7.37	5.19
47	E13a_E15a	KnownJunction	0	5.82	6.23	2.39	3.09	0.00	5.63	1.78
48	E14_Aa	NovelBoundary	0	18.44	2.63	6.93	4.25	23.70	4.53	4.41
49	ER14a	ExonRegion	1	30.02	16.00	16.81	5.44	65.33	27.06	12.08
50	E14_Da	NovelBoundary	0	13.94	2.89	4.45	1.25	7.49	1.58	5.92
51	E14a_E15a	KnownJunction	1	11.05	15.58	12.14	5.53	59.75	20.42	4.18
52	ER15a	ExonRegion	0	19.11	19.05	17.77	9.99	65.49	21.95	14.75
53	E15a_E16a	KnownJunction	0	15.72	16.95	16.91	14.90	38.98	28.54	12.64
54	ER16a	ExonRegion	0	18.61	24.36	19.28	12.34	66.30	20.98	17.14
55	E16a_E17a	KnownJunction	0	22.00	21.10	17.70	14.49	76.90	13.21	16.50
56	ER17a	ExonRegion	0	17.54	19.55	19.98	14.15	67.04	20.42	14.97
57	E17a_E18a	KnownJunction	1	18.93	10.82	25.13	11.38	59.48	12.14	9.06
58	ER18a	ExonRegion	0	32.60	16.47	27.44	15.61	98.02	24.45	18.91
59	E18a_E19a	KnownJunction	0	45.58	20.57	27.43	18.83	162.66	37.52	21.48
60	ER19a	ExonRegion	0	63.36	35.48	27.66	24.49	158.50	36.35	27.12
61	E19a_E20a	KnownJunction	0	34.33	16.92	13.36	14.09	121.37	16.24	17.18
62	ER20a	ExonRegion	0	37.19	26.51	20.93	15.75	112.64	18.67	20.88
63	E20a_E21a	KnownJunction	0	23.15	31.79	17.89	14.95	76.86	19.14	20.54
64	ER21a	ExonRegion	0	27.76	28.20	21.67	19.38	77.68	18.49	19.26
65	E21a_E22a	KnownJunction	0	17.49	15.58	15.76	13.68	45.00	7.96	13.41
66	ER22a	ExonRegion	0	14.70	15.87	12.73	11.33	55.79	9.71	8.90
67	E22a_E23a	KnownJunction	0	14.94	15.55	15.22	8.07	74.07	15.54	9.44
68	E23_Aa	NovelBoundary	0	5.44	5.96	3.39	2.44	5.44	8.39	3.64
69	ER23a	ExonRegion	0	24.70	21.07	19.18	15.27	71.48	19.12	14.93
70	E23a_E24a	KnownJunction	0	20.96	17.02	19.28	17.15	72.02	17.58	16.14
71	ER24a	ExonRegion	0	22.59	28.43	18.99	15.54	61.64	28.68	17.16
72	E24a_E25a	KnownJunction	0	20.03	31.50	17.85	18.69	56.02	35.03	16.71
73	ER25a	ExonRegion	0	22.79	31.55	13.95	19.03	74.77	30.64	11.95
74	E25a_E26a	KnownJunction	0	29.36	22.96	10.39	16.23	94.98	27.74	12.31
75	ER26a	ExonRegion	0	36.27	33.10	14.73	26.10	85.03	35.95	19.25
76	E26a_E27a	KnownJunction	0	27.92	27.14	12.20	21.00	92.65	47.41	22.20
77	E27_Aa	NovelBoundary	1	21.88	3.23	6.91	9.32	15.84	9.25	43.40
78	ER27a	ExonRegion	0	23.08	25.00	11.30	19.46	66.24	32.89	23.03
79	E27a_E29a	KnownJunction	0	9.08	0.00	1.94	1.68	27.73	1.29	4.60
80	E27a_E31a	KnownJunction	0	3.94	13.82	2.21	5.17	10.51	10.99	6.42
81	ER28a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
82	ER29a	ExonRegion	0	10.57	9.26	3.13	7.00	26.23	4.93	7.35
83	E29a_E31a	KnownJunction	0	4.19	6.31	0.00	4.25	6.02	7.64	0.00
84	ER29b	ExonRegion	0	0.00	0.00	0.00	0.00	1.62	0.00	1.86
85	ER30a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
86	ER31a	ExonRegion	0	4.45	6.23	3.11	2.18	7.56	9.39	3.92
87	ER31b	ExonRegion	0	1.22	0.00	1.00	0.88	0.33	0.72	0.32