Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ZFYVE9 Gene 0 38.72 31.08 89.72 30.60 104.59 20.37 176.47 2 361625 Transcript 0 0.00 1.76 1.31 0.00 1.12 0.00 1.94 3 287727 Transcript 0 0 0 0 0 0 0 0 4 357206 Transcript 0 0.72 2.50 5.39 1.33 28.77 3.32 4.87 5 371591 Transcript 0 0.00 2.43 1.35 0.00 1.62 0.00 0.00 6 IG9_AR3 ActiveIntergenicRegion 0 0.42 8.10 1.25 7.32 2.30 1.18 2.21 7 ER1a ExonRegion 0 1.02 10.69 5.13 8.06 21.54 6.05 12.05 8 E2_Ab NovelBoundary 0 8.23 24.38 28.01 18.67 54.24 19.67 54.32 9 ER2a ExonRegion 0 7.43 22.58 23.31 15.48 61.55 17.16 45.59 10 ER2b ExonRegion 0 26.46 48.01 67.51 39.17 51.37 24.77 121.50 11 E2a_E3a KnownJunction 0 36.77 59.24 70.11 43.13 39.19 33.02 142.15 12 ER3a ExonRegion 0 30.56 59.62 90.03 43.02 67.17 32.04 159.12 13 E3a_E4a KnownJunction 0 47.97 52.94 117.39 50.55 90.07 31.60 191.18 14 ER4a ExonRegion 0 46.88 35.45 115.78 36.37 103.50 19.50 186.79 15 E4a_E5a KnownJunction 0 37.70 42.45 89.87 41.02 146.13 24.12 283.12 16 ER5a ExonRegion 1 24.55 42.24 70.03 33.77 111.14 21.84 242.95 17 E5_Da KnownBoundary 0 0.00 1.52 0.89 0.00 1.98 0.00 1.83 18 E5a_E6a KnownJunction 1 19.69 36.49 65.69 31.10 85.32 21.82 241.56 19 E5a_E7a KnownJunction 0 0.72 2.50 5.39 1.33 28.77 3.32 4.87 20 ER5b ExonRegion 0 0.00 1.76 1.31 0.00 1.12 0.00 1.94 21 ER6a ExonRegion 0 26.38 34.57 71.37 28.64 98.76 16.06 242.22 22 E6a_E7a KnownJunction 1 12.95 26.40 52.42 16.55 60.77 12.73 151.21 23 ER7a ExonRegion 0 23.42 27.93 71.96 30.62 108.95 19.93 184.44 24 E7a_E8a KnownJunction 0 33.08 35.02 88.88 24.73 85.76 22.03 194.05 25 ER8a ExonRegion 0 37.56 30.50 101.14 39.25 122.06 23.33 223.78 26 E8a_E9a KnownJunction 0 37.19 36.70 102.27 37.76 139.79 30.20 224.57 27 ER9a ExonRegion 0 53.95 31.74 118.01 40.19 178.34 37.44 229.28 28 E9a_E10a KnownJunction 0 63.44 35.91 132.39 31.99 173.08 37.63 245.80 29 ER10a ExonRegion 0 65.49 43.59 147.35 29.43 193.44 39.94 293.72 30 E10a_E11a KnownJunction 0 71.78 44.08 127.39 23.24 205.95 39.82 256.56 31 ER11a ExonRegion 0 58.08 39.70 112.19 37.52 161.81 32.92 274.13 32 E11a_E12a KnownJunction 0 50.22 43.95 93.25 47.79 150.05 29.85 264.17 33 ER12a ExonRegion 0 32.77 46.49 76.94 42.86 127.91 22.05 225.51 34 E12a_E13a KnownJunction 1 26.55 43.48 63.59 35.87 113.33 10.32 210.89 35 ER13a ExonRegion 0 50.72 41.74 102.33 41.47 117.36 26.05 292.23 36 E13a_E14a KnownJunction 0 41.09 22.23 77.94 41.02 105.61 21.33 165.47 37 E14_Aa NovelBoundary 0 3.27 9.93 2.39 1.33 0.00 2.49 4.63 38 ER14a ExonRegion 0 52.30 37.31 108.16 45.73 160.00 29.28 257.78 39 E14a_E15a KnownJunction 0 59.60 24.25 104.41 21.56 74.25 27.07 174.93 40 E15_Aa NovelBoundary 0 2.44 11.80 0.00 3.36 0.00 3.27 4.13 41 ER15a ExonRegion 0 41.77 23.53 84.33 26.85 101.26 23.34 169.56 42 E15a_E16a KnownJunction 0 26.12 23.43 72.43 28.36 112.45 18.49 162.88 43 ER16a ExonRegion 0 33.16 22.78 70.81 27.11 139.83 19.52 171.96 44 E16a_E17a KnownJunction 0 14.34 26.11 62.25 21.89 111.85 19.56 130.42 45 E17_Aa NovelBoundary 0 3.74 9.38 4.34 2.65 4.91 7.08 8.79 46 ER17a ExonRegion 0 36.59 23.54 80.72 26.89 168.93 26.04 179.73 47 E17a_E18a KnownJunction 0 44.78 25.48 97.70 39.04 245.56 22.67 260.82 48 E18_Aa NovelBoundary 1 2.12 14.84 5.40 2.44 3.94 3.32 6.54 49 ER18a ExonRegion 0 32.31 24.06 63.34 28.47 123.01 17.01 172.82 50 E18a_E19a KnownJunction 0 66.99 24.30 80.42 30.10 221.95 15.20 226.09 51 E19_Aa NovelBoundary 1 2.77 19.81 2.54 7.75 0.99 2.41 6.59 52 ER19a ExonRegion 0 20.04 11.31 28.12 7.57 51.88 11.40 54.15 53 ER19b ExonRegion 0 0.00 2.43 1.35 0.00 1.62 0.00 0.00 54 IG10 Intergenic 0 9.73 12.79 12.15 8.04 8.60 6.10 15.75 55 IG10_AR1 ActiveIntergenicRegion 0 2.91 8.74 5.31 5.15 9.32 3.74 15.33 56 IG10_AR2 ActiveIntergenicRegion 0 6.71 11.58 8.08 12.20 7.44 8.02 12.02 57 IG10_SR2 SilentIntergenicRegion 0 13.30 16.00 16.07 8.85 9.80 7.37 20.10 58 IG10_AR3 ActiveIntergenicRegion 0 13.45 14.60 15.98 9.19 7.98 5.26 14.08