Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 SPATA6 Gene 0 16.24 3.84 16.64 2.59 41.24 6.70 10.01 2 371847 Transcript 0 7.53 1.35 8.58 0.69 17.43 3.73 6.92 3 371843 Transcript 0 16.45 2.26 14.05 1.46 39.44 3.33 7.28 4 396199 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 371841 Transcript 0 0.00 0.00 0.00 0.00 0.26 0.00 0.00 6 ER1a ExonRegion 0 1.59 0.56 0.49 0.00 1.27 0.05 1.12 7 E1_Ab KnownBoundary 0 1.65 1.18 1.29 0.00 5.60 0.00 2.59 8 ER1b ExonRegion 0 2.59 2.78 4.12 0.00 34.14 5.49 4.24 9 E1a_E2a KnownJunction 0 2.94 7.46 5.19 0.00 32.64 10.53 5.39 10 ER2a ExonRegion 0 14.24 7.93 13.94 2.73 34.72 9.59 10.01 11 E2a_E3a KnownJunction 0 15.29 10.11 15.46 2.49 38.50 11.87 7.84 12 ER3a ExonRegion 0 17.30 9.50 18.99 3.05 46.18 14.91 12.42 13 E3a_E4a KnownJunction 0 15.77 6.02 16.07 3.09 59.50 10.53 10.52 14 ER4a ExonRegion 0 30.74 6.22 22.50 3.77 72.62 23.38 19.92 15 E4a_E5a KnownJunction 1 40.82 8.12 19.90 1.52 83.61 24.47 18.44 16 ER5a ExonRegion 0 43.06 7.46 30.22 6.08 60.24 14.47 15.88 17 E5a_E7a KnownJunction 0 29.66 2.57 20.23 4.09 66.55 14.04 17.15 18 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER7a ExonRegion 0 31.53 5.40 25.25 2.94 71.40 9.87 16.97 20 E7_Da NovelBoundary 1 13.52 0.00 17.82 0.00 16.16 0.00 0.64 21 E7a_E9a KnownJunction 0 27.66 8.04 30.58 2.76 50.53 4.02 18.06 22 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.53 0.00 0.00 23 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER9a ExonRegion 0 20.67 6.00 32.81 7.06 47.13 9.57 18.53 25 E9a_E10a KnownJunction 1 18.34 5.31 30.35 1.44 80.02 5.09 8.96 26 ER10a ExonRegion 0 13.69 3.80 19.17 1.46 46.81 6.02 9.40 27 E10a_E11a KnownJunction 0 12.72 3.10 17.04 3.31 59.71 8.98 10.10 28 ER11a ExonRegion 0 12.46 3.44 14.65 2.40 46.22 9.27 9.66 29 E11a_E12a KnownJunction 0 8.28 1.63 10.75 1.08 31.61 9.11 5.75 30 ER12a ExonRegion 0 10.90 3.53 16.73 2.01 42.52 11.05 11.45 31 E12a_E13a KnownJunction 0 16.62 5.20 17.40 6.01 44.58 5.39 12.96 32 ER13a ExonRegion 0 15.04 5.84 19.06 3.26 62.84 8.11 15.33 33 E13_Da KnownBoundary 0 13.35 2.89 14.49 0.00 49.89 7.10 8.60 34 E13a_E14a KnownJunction 0 2.64 0.00 3.75 1.19 15.40 3.03 6.45 35 ER13b ExonRegion 0 11.62 2.28 14.20 0.60 30.12 5.95 9.67 36 E13b_E14a KnownJunction 0 9.36 1.21 11.05 1.46 20.89 5.20 9.97 37 ER14a ExonRegion 0 13.41 3.42 17.66 1.03 47.35 6.33 14.65 38 E14b_E15a KnownJunction 1 22.01 0.00 13.69 1.11 38.50 8.28 6.16 39 ER14b ExonRegion 0 18.51 0.20 16.60 0.00 42.38 8.89 7.48 40 ER15a ExonRegion 0 16.00 4.21 14.37 3.33 50.35 6.22 8.62 41 E15_Da KnownBoundary 0 14.39 5.67 14.70 1.08 54.75 13.43 7.95 42 ER15b ExonRegion 0 16.45 2.26 14.05 1.46 39.44 3.33 7.28 43 IG34_AR10 ActiveIntergenicRegion 0 8.77 2.08 9.19 2.13 32.70 3.67 7.75 44 IG34_SR8 SilentIntergenicRegion 0 4.02 0.00 3.89 1.19 33.27 0.57 2.88 45 IG34_SR7 SilentIntergenicRegion 0 0.00 0.00 0.00 0.00 11.34 0.00 0.00 46 IG34_AR8 ActiveIntergenicRegion 0 3.43 0.63 3.31 0.28 25.50 1.63 2.94