Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ECHDC2	Gene	0	84.51	60.25	36.78	31.18	30.57	37.46	55.24
2	358358	Transcript	0	0	0	0	0	0	0	0
3	371522	Transcript	0	24.33	14.59	6.75	4.57	9.15	4.03	15.69
4	371520	Transcript	0	22.37	19.96	14.36	15.55	8.30	17.44	17.80
5	ER1a	ExonRegion	0	28.34	8.25	9.51	5.30	6.01	5.01	19.09
6	ER1b	ExonRegion	0	27.79	22.22	9.74	13.03	6.90	13.32	23.56
7	E1_Da	KnownBoundary	0	3.84	7.33	1.61	0.00	0.00	0.00	5.04
8	E1a_E2a	NovelJunction	0	16.36	10.14	8.35	21.02	4.91	10.18	7.84
9	E1a_E3b	KnownJunction	1	13.15	10.19	4.37	5.17	2.07	5.15	15.99
10	ER1c	ExonRegion	0	3.49	4.88	0.45	1.37	1.02	0.04	5.31
11	E1b_E2a	KnownJunction	0	1.35	1.39	0.00	0.00	2.05	0.00	0.87
12	I1_AR2	ActiveIntronRegion	0	9.27	7.13	4.02	0.62	22.67	2.36	6.68
13	I1	Intron	1	16.93	12.70	7.78	3.92	10.05	2.58	24.37
14	I1_AR1	ActiveIntronRegion	1	17.87	6.68	3.88	0.91	6.80	3.98	13.63
15	I1_SR1	SilentIntronRegion	1	26.48	13.72	9.65	2.84	10.19	3.94	24.89
16	I1_AR2	ActiveIntronRegion	1	20.30	16.06	11.72	3.74	10.82	2.50	27.66
17	I1_SR2	SilentIntronRegion	1	2.94	6.22	5.86	2.49	11.15	1.23	15.08
18	I1_AR4	ActiveIntronRegion	1	35.00	11.27	11.87	6.07	24.21	1.79	37.74
19	I1_AR6	ActiveIntronRegion	1	13.70	11.94	7.11	3.36	8.02	2.10	20.50
20	I1_SR6	SilentIntronRegion	1	24.70	25.06	8.85	8.07	12.57	2.45	31.46
21	I1_AR7	ActiveIntronRegion	1	12.14	12.60	6.14	4.03	7.65	2.99	23.24
22	E2_Aa	NovelBoundary	1	11.47	30.92	8.91	7.45	16.32	2.89	31.14
23	ER2a	ExonRegion	0	47.13	38.45	27.39	28.30	16.62	29.18	41.83
24	E2_Da	NovelBoundary	1	8.88	16.18	3.74	4.88	7.40	0.00	33.69
25	E2a_E3a	KnownJunction	1	28.37	25.67	24.30	22.65	5.26	33.79	13.34
26	E3_Aa	NovelBoundary	1	12.07	24.43	7.42	7.42	11.87	8.71	41.36
27	ER3a	ExonRegion	0	48.48	46.94	30.64	37.24	22.43	40.39	40.73
28	E3_Ab	KnownBoundary	0	64.81	49.08	44.38	51.07	16.41	39.69	45.23
29	ER3b	ExonRegion	0	87.85	72.11	54.19	46.70	31.73	50.61	91.12
30	E3a_E4a	KnownJunction	0	86.62	77.53	50.43	35.65	28.61	61.40	94.09
31	ER4a	ExonRegion	0	75.13	74.91	31.68	35.88	29.16	35.30	71.17
32	E4a_E5a	KnownJunction	0	77.16	78.97	31.38	25.57	26.10	26.59	77.38
33	E4a_E11a	NovelJunction	1	1.65	1.05	0.00	16.39	0.00	8.15	0.00
34	E5_Aa	NovelBoundary	1	32.91	7.75	15.99	0.00	1.18	1.63	2.46
35	ER5a	ExonRegion	0	68.58	76.75	39.94	24.84	29.70	30.51	78.64
36	E5a_E6a	KnownJunction	0	28.91	16.08	9.60	3.03	9.43	5.15	16.08
37	E5a_E7a	KnownJunction	0	21.13	22.36	14.84	6.20	23.33	15.44	38.47
38	E5a_E8a	NovelJunction	0	9.15	11.61	7.92	4.82	1.15	5.68	2.41
39	E6_Aa	NovelBoundary	0	14.32	17.60	9.63	8.40	15.93	7.88	4.61
40	ER6a	ExonRegion	0	27.37	15.79	8.48	5.75	10.13	5.30	18.89
41	E6a_E7a	KnownJunction	1	16.72	11.90	2.18	4.93	7.88	1.63	12.10
42	I6	Intron	1	46.28	26.54	16.60	7.41	21.08	7.61	31.18
43	I6_AR1	ActiveIntronRegion	1	46.34	26.57	16.62	7.42	21.11	7.62	31.23
44	E7_Aa	NovelBoundary	1	28.42	20.62	6.52	5.63	6.92	3.00	11.15
45	ER7a	ExonRegion	1	34.93	32.50	18.69	6.74	28.93	13.25	47.07
46	E7a_E8a	KnownJunction	0	32.08	35.47	16.58	9.24	21.23	13.24	41.75
47	ER8a	ExonRegion	0	65.39	70.72	31.78	19.93	27.44	29.31	63.16
48	E8a_E9a	KnownJunction	0	114.59	68.36	33.74	18.61	31.33	32.27	52.27
49	I8_SR2	SilentIntronRegion	0	2.95	3.40	2.78	0.00	8.80	0.71	2.50
50	I8_SR3	SilentIntronRegion	0	4.36	4.44	3.81	0.37	13.15	1.44	5.18
51	ER9a	ExonRegion	0	135.46	60.65	29.65	19.88	50.21	27.16	58.21
52	E9_Da	NovelBoundary	0	3.50	6.57	1.97	2.98	12.79	1.61	2.15
53	E9a_E10a	KnownJunction	1	142.50	54.12	26.96	18.91	72.18	17.82	63.07
54	E9a_E11a	NovelJunction	1	26.69	9.80	15.40	22.40	7.70	31.19	9.10
55	I9	Intron	0	3.94	7.04	2.61	1.88	9.23	2.79	3.33
56	I9_AR1	ActiveIntronRegion	0	3.94	7.05	2.62	1.88	9.25	2.79	3.34
57	E10_Aa	NovelBoundary	0	2.50	5.73	7.70	5.69	21.00	5.17	5.98
58	ER10a	ExonRegion	1	203.28	97.92	49.80	20.50	73.83	48.84	82.34
59	E10_Da	NovelBoundary	0	1.72	10.22	2.33	7.10	14.71	4.98	3.14
60	E10a_E11a	KnownJunction	1	213.46	108.97	58.47	20.40	65.24	70.97	79.42
61	I10	Intron	0	3.72	5.59	3.52	5.40	11.66	3.22	3.23
62	I10_AR1	ActiveIntronRegion	0	3.73	5.61	3.53	5.41	11.69	3.23	3.23
63	ER11a	ExonRegion	0	185.62	106.14	74.99	60.49	59.46	75.34	83.45
64	ER11b	ExonRegion	0	5.38	2.43	3.39	3.74	2.43	1.23	4.72