Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SLFNL1	Gene	0	3.70	8.89	7.86	9.51	4.27	6.10	26.65
2	359345	Transcript	0	4.27	8.49	8.70	8.91	4.03	3.90	32.48
3	372611	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	372613	Transcript	0	0	0	0	0	0	0	0
5	397197	Transcript	0	0	0	0	0	0	0	0
6	302946	Transcript	0	0	0	0	0	0	0	0
7	IG8	Intergenic	0	3.75	8.67	8.05	7.51	2.93	4.91	26.94
8	IG8_SR1	SilentIntergenicRegion	0	3.69	8.65	7.93	7.75	2.95	5.23	27.24
9	IG8_AR1	ActiveIntergenicRegion	0	5.41	10.84	11.43	6.17	3.40	2.03	29.33
10	ER1a	ExonRegion	0	4.27	8.49	8.70	8.91	4.03	3.90	32.48
11	E1_Ab	KnownBoundary	0	1.70	4.62	5.35	5.04	2.17	3.59	10.59
12	E1_Ac	KnownBoundary	0	0.00	3.26	0.89	0.00	2.26	0.00	7.97
13	E1_Ad	KnownBoundary	0	0.87	6.15	1.41	1.08	0.00	3.32	21.22
14	ER1b	ExonRegion	0	1.92	10.26	6.13	3.88	3.28	4.77	26.61
15	ER1c	ExonRegion	0	1.44	12.91	5.42	5.92	1.82	3.06	30.86
16	ER1d	ExonRegion	0	1.41	9.23	2.57	3.25	4.88	3.27	28.79
17	E1_Da	KnownBoundary	0	0.00	4.05	0.00	0.00	1.18	3.03	14.06
18	E1a_E1e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E1_Db	KnownBoundary	0	0.00	8.75	3.03	1.41	1.15	2.84	9.52
20	E1b_E1f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER1e	ExonRegion	1	0.11	12.15	3.00	1.60	1.62	6.13	21.20
22	ER1f	ExonRegion	0	2.76	9.82	6.94	10.82	3.47	5.70	28.15
23	E1_Ae	KnownBoundary	0	1.90	12.61	4.81	12.52	3.39	5.74	21.81
24	ER1g	ExonRegion	0	1.18	12.85	6.05	7.88	2.38	5.97	27.67
25	E1_Dc	KnownBoundary	0	0.85	10.01	5.58	8.61	3.09	10.10	27.47
26	E1c_E1f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER1h	ExonRegion	0	3.80	6.60	4.62	10.38	3.10	7.41	25.49
28	E1_Af	KnownBoundary	0	2.92	6.41	4.76	7.83	1.96	3.81	21.38
29	ER1i	ExonRegion	0	1.24	5.21	7.32	5.74	1.71	4.92	19.69
30	E1_Dd	NovelBoundary	0	1.87	6.83	2.60	5.91	2.33	0.00	18.85
31	E1d_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.54
32	E1d_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	I1	Intron	0	5.90	9.26	10.43	11.70	8.28	8.76	29.64
34	I1_AR1	ActiveIntronRegion	0	5.37	9.77	12.21	10.03	8.97	7.59	30.56
35	I1_SR1	SilentIntronRegion	0	4.82	6.04	7.12	11.27	6.40	9.72	27.04
36	I1_AR2	ActiveIntronRegion	0	8.62	10.61	9.50	15.36	8.74	11.91	31.25
37	I1_SR2	SilentIntronRegion	0	4.43	8.01	6.54	14.43	5.76	7.01	24.03
38	E2_Aa	NovelBoundary	0	1.75	11.56	7.69	12.19	2.17	5.60	21.50
39	ER2a	ExonRegion	0	3.39	5.31	3.59	11.30	4.91	6.95	18.84
40	E2_Ab	KnownBoundary	0	3.61	5.33	6.14	13.49	7.52	9.41	25.32
41	ER2b	ExonRegion	0	2.19	10.10	6.53	12.82	6.90	9.65	23.25
42	E2_Da	NovelBoundary	0	1.03	11.22	6.34	5.17	3.20	7.34	24.36
43	E2a_E3a	KnownJunction	0	0.00	0.00	1.39	1.06	0.00	3.06	0.00
44	E2a_E4a	KnownJunction	0	0.00	0.00	2.28	3.09	0.00	3.56	0.69
45	I2	Intron	0	1.36	7.90	2.60	6.23	3.19	2.52	11.70
46	I2_SR1	SilentIntronRegion	0	1.37	7.96	2.61	6.27	3.21	2.54	11.78
47	E3_Aa	NovelBoundary	0	0.00	7.57	1.45	4.31	1.08	2.79	13.66
48	ER3a	ExonRegion	0	1.76	4.89	1.53	5.85	2.83	3.29	6.14
49	E3_Da	NovelBoundary	0	1.03	10.06	5.19	6.53	1.04	9.14	12.51
50	E3a_E4a	KnownJunction	0	0.00	1.55	0.00	3.03	0.00	1.02	0.00
51	I3	Intron	0	1.75	6.73	5.97	4.37	5.20	4.17	17.78
52	I3_SR1	SilentIntronRegion	0	1.38	5.76	3.64	3.33	4.04	4.99	15.49
53	I3_AR1	ActiveIntronRegion	0	1.92	7.20	7.07	4.86	5.76	3.81	18.91
54	E4_Aa	NovelBoundary	0	1.34	5.36	4.76	9.18	7.91	5.74	20.68
55	ER4a	ExonRegion	0	7.55	13.03	12.28	12.60	7.03	11.58	25.80
56	IG7	Intergenic	0	5.22	7.16	9.02	7.19	7.72	4.52	18.95
57	IG7_SR4	SilentIntergenicRegion	0	0.27	7.10	3.10	4.68	2.97	2.50	8.04
58	IG7_SR3	SilentIntergenicRegion	0	5.25	5.97	8.27	6.21	7.48	4.21	19.02
59	IG7_AR2	ActiveIntergenicRegion	0	9.10	12.71	15.71	11.18	11.05	4.85	23.16
60	IG7_SR1	SilentIntergenicRegion	0	4.91	6.21	10.42	10.26	9.73	8.50	25.49