Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	KIAA0319L	Gene	0	93.44	26.21	65.03	20.48	141.54	12.49	72.84
2	335883	Transcript	1	23.02	4.37	20.22	3.93	16.29	2.16	2.97
3	373258	Transcript	0	2.60	1.52	1.44	0.00	3.20	0.00	0.00
4	373266	Transcript	0	5.16	0.87	3.28	0.67	10.11	0.44	4.02
5	325722	Transcript	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	13.15	9.67	8.53	3.87	19.20	2.84	7.66
7	E1a_E2a	KnownJunction	1	12.90	24.59	13.34	2.79	6.11	5.92	20.57
8	ER2a	ExonRegion	0	52.80	32.64	53.29	16.26	77.72	15.14	54.17
9	E2a_E3a	KnownJunction	1	62.15	39.30	53.63	17.23	81.88	34.81	69.75
10	E2a_E4a	NovelJunction	0	5.16	2.97	11.53	2.82	11.23	0.00	14.93
11	ER3a	ExonRegion	0	102.00	47.00	90.99	25.39	153.58	22.71	103.58
12	E3a_E4a	KnownJunction	0	134.54	59.48	112.28	41.10	226.56	20.93	154.13
13	ER4a	ExonRegion	0	157.67	57.38	136.87	48.21	204.41	16.18	140.94
14	E4a_E5a	KnownJunction	1	108.77	46.61	78.97	52.12	123.06	10.29	88.77
15	E4a_E6a	KnownJunction	0	2.60	1.52	1.44	0.00	3.20	0.00	0.00
16	E5_Aa	NovelBoundary	1	51.05	0.00	34.70	1.68	0.90	0.00	0.86
17	ER5a	ExonRegion	0	157.71	49.55	131.23	38.19	223.04	15.10	119.59
18	E5a_E6a	KnownJunction	0	161.78	49.00	120.74	38.52	286.98	17.07	122.00
19	ER6a	ExonRegion	0	144.17	46.76	89.50	36.51	205.61	22.61	110.94
20	E6a_E7a	KnownJunction	0	155.83	32.45	92.33	28.96	188.73	18.17	113.49
21	ER7a	ExonRegion	0	175.24	39.57	116.71	31.32	226.10	23.52	142.34
22	E7a_E8a	KnownJunction	0	183.12	39.91	108.70	23.62	284.40	17.10	135.04
23	ER8a	ExonRegion	0	188.55	35.40	116.14	23.01	337.82	21.37	140.57
24	E8a_E9a	KnownJunction	0	197.39	43.56	153.68	22.86	272.16	18.33	169.28
25	ER9a	ExonRegion	0	154.14	39.21	127.05	25.67	194.66	17.67	144.64
26	E9a_E10a	KnownJunction	0	146.72	31.21	108.83	21.94	286.13	11.82	137.87
27	E9a_E11a	NovelJunction	1	5.62	1.47	15.00	0.00	1.08	4.29	0.57
28	ER10a	ExonRegion	0	118.39	33.64	104.42	31.36	244.97	15.38	149.38
29	E10a_E11a	KnownJunction	0	79.78	31.66	72.25	25.76	210.06	13.43	137.24
30	ER11a	ExonRegion	0	79.93	38.51	80.17	27.26	212.58	17.03	128.62
31	E11a_E12a	KnownJunction	0	80.83	48.76	73.09	24.46	226.06	21.25	129.18
32	ER12a	ExonRegion	0	124.23	34.16	101.65	26.14	286.44	21.81	159.96
33	E12a_E13a	KnownJunction	0	135.89	30.08	111.10	32.73	198.46	14.28	118.56
34	ER13a	ExonRegion	0	109.75	28.23	96.94	35.08	259.09	16.53	148.32
35	E13a_E14a	KnownJunction	0	167.30	31.18	122.87	34.19	357.80	11.04	169.86
36	ER14a	ExonRegion	0	130.59	35.70	103.21	34.42	271.68	15.64	139.11
37	E14a_E15a	KnownJunction	0	124.67	50.02	88.18	31.83	275.04	14.71	115.10
38	ER15a	ExonRegion	0	190.54	45.47	122.17	38.30	342.54	18.41	149.04
39	E15a_E16a	KnownJunction	0	191.75	42.80	106.23	25.36	257.09	18.09	110.87
40	E15a_E17a	NovelJunction	1	39.20	4.49	24.50	5.80	34.93	3.78	5.90
41	ER16a	ExonRegion	0	262.80	51.71	121.47	32.22	343.04	15.03	126.06
42	E16a_E17a	KnownJunction	1	419.50	68.73	149.57	21.19	493.75	23.24	156.93
43	ER17a	ExonRegion	0	401.33	62.20	167.05	34.96	496.41	26.68	162.68
44	E17_Da	NovelBoundary	1	67.18	0.00	40.71	8.51	16.57	0.00	0.79
45	E17a_E18a	KnownJunction	0	322.95	49.08	127.05	27.47	477.54	17.02	190.92
46	I17_SR1	SilentIntronRegion	1	25.43	0.58	18.69	2.95	11.65	0.59	0.30
47	ER18a	ExonRegion	0	309.06	48.34	146.79	40.77	485.16	20.04	186.32
48	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	E18a_E19b	KnownJunction	0	246.14	46.79	137.21	34.43	446.95	18.22	198.91
50	E18a_E20a	NovelJunction	0	7.03	1.18	3.03	7.86	9.94	6.32	4.23
51	ER19a	ExonRegion	0	10.32	1.74	6.56	1.34	20.22	0.88	8.05
52	ER19b	ExonRegion	0	233.78	50.81	140.09	34.60	397.10	24.68	217.11
53	E19a_E20a	KnownJunction	0	190.23	52.44	114.93	31.15	301.76	21.23	179.93
54	ER20a	ExonRegion	0	180.62	52.45	111.19	38.10	347.66	18.35	176.28
55	E20_Da	KnownBoundary	1	5.82	1.47	19.69	4.28	9.61	0.00	3.07
56	E20a_E21a	KnownJunction	0	118.57	34.36	74.70	27.44	227.42	10.08	145.02
57	ER20b	ExonRegion	1	23.02	4.37	20.22	3.93	16.29	2.16	2.97
58	E20_Db	NovelBoundary	0	36.03	78.47	19.90	59.09	21.95	80.72	12.02
59	I20	Intron	0	17.89	5.91	17.54	6.28	11.74	2.45	3.59
60	I20_AR1	ActiveIntronRegion	0	17.89	5.91	17.55	6.28	11.74	2.45	3.59
61	E21_Aa	NovelBoundary	1	59.43	8.70	46.80	5.85	10.90	3.32	2.39
62	ER21a	ExonRegion	0	91.84	29.68	58.78	27.45	140.71	17.70	75.17