Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	YARS	Gene	0	323.47	747.94	598.87	977.26	682.32	505.65	569.38
2	373477	Transcript	0	474.39	1041.69	873.95	1281.68	1002.32	635.28	784.37
3	ER1a	ExonRegion	0	23.26	79.55	47.13	108.07	53.08	47.67	55.23
4	E1a_E2a	KnownJunction	0	88.32	523.64	164.63	528.60	103.88	235.17	216.35
5	E1a_E3a	NovelJunction	0	0.00	14.61	8.58	31.48	2.14	12.14	1.56
6	E1a_E4a	NovelJunction	1	2.45	24.33	8.38	64.72	3.27	40.55	3.74
7	ER2a	ExonRegion	0	271.67	814.83	526.70	952.95	575.07	460.11	559.87
8	E2_Da	NovelBoundary	1	144.32	4.44	283.83	12.03	2.24	6.19	0.66
9	E2a_E3a	KnownJunction	0	371.27	962.48	777.26	1023.72	950.65	506.81	768.25
10	ER3a	ExonRegion	0	404.94	1320.11	872.97	1465.64	890.40	675.32	902.77
11	E3a_E4a	KnownJunction	0	403.80	1279.18	923.41	1423.18	1029.12	629.10	880.45
12	ER4a	ExonRegion	0	373.89	1254.19	889.23	1548.19	994.30	744.55	1000.85
13	E4a_E5a	KnownJunction	0	273.23	897.70	735.17	1030.79	733.06	599.75	710.74
14	E4a_E6a	NovelJunction	1	6.41	14.66	10.38	34.32	4.15	4.15	2.65
15	ER5a	ExonRegion	0	409.85	1034.61	950.23	1265.85	1205.39	655.89	875.20
16	E5a_E6a	KnownJunction	0	548.05	1065.02	1097.76	1288.94	1358.83	660.48	876.54
17	E5a_E7a	NovelJunction	1	3.04	44.40	7.29	8.72	1.96	5.52	1.86
18	ER6a	ExonRegion	0	681.30	1210.60	1209.78	1474.30	1424.08	726.88	900.44
19	E6a_E7a	KnownJunction	0	738.75	1362.23	1268.02	1610.95	1564.27	740.88	839.62
20	E6a_E8a	NovelJunction	1	19.93	10.56	25.48	44.38	5.03	23.58	0.89
21	E6a_E9a	NovelJunction	1	3.81	2.63	4.50	13.33	1.18	16.19	0.76
22	ER7a	ExonRegion	0	1172.39	1635.22	1742.30	2066.73	2055.04	907.73	1148.65
23	E7_Da	NovelBoundary	1	145.07	93.42	103.91	115.71	63.60	62.36	14.40
24	E7a_E8a	KnownJunction	0	1048.63	1527.05	1604.42	1907.89	1461.25	840.41	1134.15
25	I7	Intron	1	74.76	38.90	67.50	50.84	37.56	40.14	11.09
26	I7_AR1	ActiveIntronRegion	1	75.08	39.07	67.79	51.06	37.72	40.32	11.13
27	E8_Aa	NovelBoundary	1	100.12	53.65	99.53	76.67	44.45	54.08	13.41
28	ER8a	ExonRegion	0	891.61	1337.70	1335.92	1711.53	1533.78	743.72	1006.03
29	E8a_E9a	KnownJunction	0	749.60	1052.62	1161.61	1302.51	1535.62	565.82	931.74
30	I8_AR1	ActiveIntronRegion	1	68.76	24.01	52.34	44.42	33.72	21.54	5.39
31	ER9a	ExonRegion	0	556.65	881.24	1011.88	1177.96	1222.49	581.02	774.67
32	E9a_E10a	KnownJunction	0	247.23	766.36	575.89	924.70	541.72	464.60	549.27
33	ER10a	ExonRegion	0	281.58	855.61	631.55	1101.83	766.96	583.74	646.56
34	E10a_E11a	KnownJunction	0	321.40	953.15	616.60	1178.00	831.10	620.49	717.72
35	E10a_E12a	NovelJunction	0	0.00	4.52	0.00	6.12	2.35	13.91	0.00
36	ER11a	ExonRegion	0	374.44	1106.32	688.03	1396.13	825.84	739.78	790.60
37	E11a_E12a	KnownJunction	0	457.37	1046.26	691.50	1395.46	803.81	743.67	796.68
38	ER12a	ExonRegion	0	431.95	1128.17	860.71	1534.94	1020.01	825.36	966.62
39	E12a_E13a	KnownJunction	0	435.06	1202.18	899.02	1532.06	964.46	941.34	973.91
40	ER13a	ExonRegion	0	303.44	746.32	567.01	1090.98	613.70	641.82	586.26
41	IG29	Intergenic	0	3.27	5.43	8.99	15.55	3.07	5.82	5.00
42	IG29_AR1	ActiveIntergenicRegion	0	3.30	5.46	9.06	15.67	3.09	5.87	5.03