Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	COL9A2	Gene	0	8.34	7.24	1.25	3.51	8.68	0.39	0.28
2	372736	Transcript	0	0.00	0.00	0.00	0.01	0.07	0.00	0.00
3	372729	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	372748	Transcript	0	5.66	3.06	0.00	3.56	5.73	0.00	0.48
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.18	0.00	0.00
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	0.00	0.00	0.00	0.03	0.11	0.00	0.00
8	E2_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2b	ExonRegion	0	0.55	0.00	0.36	2.42	0.25	0.00	0.00
10	E2a_E3a	KnownJunction	0	0.98	0.00	0.00	2.63	0.85	0.00	0.00
11	ER3a	ExonRegion	0	0.81	0.00	0.44	1.66	1.22	0.00	0.00
12	E3a_E4a	KnownJunction	0	1.89	0.00	1.72	0.00	2.05	0.00	0.00
13	E3a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER4a	ExonRegion	0	2.65	1.01	1.19	0.76	3.76	0.00	0.00
15	E4a_E5a	KnownJunction	0	6.14	1.60	0.89	2.74	5.74	0.00	0.00
16	ER5a	ExonRegion	0	4.99	0.89	0.96	3.50	6.95	1.19	0.00
17	E5a_E6a	KnownJunction	0	7.43	0.00	0.76	2.47	8.35	0.00	0.00
18	ER6a	ExonRegion	0	9.48	2.20	0.97	1.59	10.30	1.02	0.00
19	E6a_E7a	KnownJunction	0	8.90	4.31	0.89	1.68	12.17	1.66	0.00
20	ER7a	ExonRegion	0	8.50	5.30	1.34	1.25	9.99	2.42	0.00
21	E7a_E8a	KnownJunction	0	1.02	1.58	0.76	0.00	6.73	1.66	0.00
22	E8a_E9a	KnownJunction	0	6.41	6.86	0.63	1.68	3.27	0.00	0.00
23	ER8a	ExonRegion	0	7.81	6.93	0.99	0.00	5.97	1.58	0.00
24	ER9a	ExonRegion	0	9.66	6.66	0.68	1.43	4.63	0.39	0.00
25	E9a_E10a	KnownJunction	0	9.63	4.49	0.00	2.93	5.60	0.00	0.00
26	ER10a	ExonRegion	0	12.28	4.56	0.57	2.08	5.87	0.00	0.07
27	E10b_E11a	KnownJunction	0	10.33	2.50	0.85	0.00	8.30	1.31	0.00
28	ER10b	ExonRegion	0	11.01	3.64	0.68	1.25	6.84	0.00	0.67
29	ER11a	ExonRegion	0	9.65	7.80	0.54	0.94	10.49	0.00	0.67
30	E11a_E12a	KnownJunction	0	6.03	10.88	0.00	2.65	14.36	0.00	0.00
31	ER12a	ExonRegion	0	8.66	10.42	0.52	2.21	11.17	0.00	0.17
32	E12a_E13a	KnownJunction	0	5.49	10.22	0.89	1.41	11.09	0.00	0.00
33	ER13a	ExonRegion	0	7.66	6.66	0.84	2.42	10.69	0.00	0.00
34	E13a_E14a	KnownJunction	0	7.94	1.52	0.89	3.31	8.44	0.00	0.00
35	ER14a	ExonRegion	0	7.21	6.57	0.95	4.20	4.90	0.00	0.00
36	E14a_E15a	KnownJunction	0	5.01	8.93	0.89	2.63	7.88	0.00	0.00
37	ER15a	ExonRegion	0	8.54	10.46	1.38	1.73	6.46	0.00	0.00
38	E15a_E16a	KnownJunction	0	8.86	8.64	2.26	2.71	6.69	0.00	0.00
39	ER16a	ExonRegion	0	10.42	9.36	0.99	1.32	11.46	0.00	0.00
40	E16a_E17a	KnownJunction	0	8.96	9.25	0.00	1.41	10.77	0.00	0.00
41	ER17a	ExonRegion	0	13.53	4.86	1.09	3.00	9.73	0.75	0.00
42	E17a_E18a	KnownJunction	0	14.85	1.29	1.78	4.50	14.18	1.66	0.00
43	ER18a	ExonRegion	0	12.98	7.40	2.06	6.40	12.58	0.98	0.00
44	E18a_E19a	KnownJunction	0	7.24	10.32	1.58	4.61	9.06	0.00	0.66
45	ER19a	ExonRegion	0	8.84	6.05	0.93	2.33	9.96	0.00	0.00
46	E19a_E20a	KnownJunction	0	13.07	1.29	1.97	0.00	10.30	0.00	0.00
47	ER20a	ExonRegion	0	10.74	7.04	1.69	0.00	5.20	1.04	0.00
48	E20a_E21a	KnownJunction	0	9.00	9.20	0.83	1.41	5.14	1.66	0.00
49	ER21a	ExonRegion	0	11.44	9.18	1.60	0.53	6.82	2.62	0.00
50	E21a_E22a	KnownJunction	0	8.06	2.50	0.89	1.35	9.06	1.34	0.00
51	ER22a	ExonRegion	0	11.27	6.10	0.59	2.36	8.23	1.66	0.00
52	E22a_E23a	KnownJunction	0	12.78	5.23	0.00	2.71	9.61	1.18	0.00
53	ER23a	ExonRegion	0	11.06	7.74	2.38	0.72	11.34	0.82	0.00
54	E23a_E24a	KnownJunction	0	8.90	7.96	3.02	0.00	10.79	1.37	0.00
55	ER24a	ExonRegion	0	8.88	7.06	1.29	2.36	6.33	2.45	0.27
56	E24a_E25a	KnownJunction	0	11.45	6.49	0.00	3.14	2.17	1.34	0.76
57	ER25a	ExonRegion	0	7.41	7.80	0.00	3.22	5.21	0.36	0.51
58	E25a_E26a	KnownJunction	0	5.34	5.88	0.00	1.68	4.45	0.00	0.00
59	ER26a	ExonRegion	0	4.80	4.62	0.36	3.81	2.36	0.00	0.00
60	E26a_E27a	KnownJunction	0	4.14	1.39	0.72	1.65	2.17	0.00	0.00
61	ER27a	ExonRegion	0	7.17	4.10	0.68	3.80	2.81	0.00	0.00
62	E27a_E28a	KnownJunction	0	5.86	3.10	1.34	3.03	1.82	0.00	0.00
63	ER28a	ExonRegion	0	8.01	3.94	0.29	2.95	4.83	0.00	0.02
64	E28a_E29a	KnownJunction	0	5.87	1.52	0.00	1.27	7.70	0.00	0.00
65	ER29a	ExonRegion	0	4.28	1.48	0.21	2.82	4.84	0.00	0.34
66	E29a_E30a	KnownJunction	0	5.26	2.34	0.00	1.68	6.45	0.00	0.00
67	E29a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	ER30a	ExonRegion	0	4.58	1.39	0.01	4.47	6.48	0.00	0.54
69	E30a_E31a	KnownJunction	0	7.13	5.44	0.00	4.52	4.24	0.00	0.89
70	ER31a	ExonRegion	0	5.69	8.61	0.53	3.89	7.46	0.11	0.65
71	E31a_E32a	KnownJunction	0	7.28	11.87	1.45	1.27	13.23	1.29	0.00
72	ER32a	ExonRegion	0	7.08	11.31	1.79	1.57	11.02	0.91	0.41
73	E32a_E33a	KnownJunction	0	8.85	12.58	2.41	3.36	6.02	0.00	0.87
74	ER33a	ExonRegion	0	13.31	13.23	2.55	6.79	15.47	0.31	0.60