Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HP1BP3	Gene	0	332.05	145.68	303.04	339.10	186.80	296.39	202.67
2	400444	Transcript	0	0	0	0	0	0	0	0
3	360142	Transcript	0	274.35	105.22	246.68	273.02	109.37	203.34	124.63
4	312239	Transcript	0	7.49	9.42	13.04	6.86	16.60	15.02	14.84
5	375000	Transcript	1	37.19	5.86	33.16	33.11	16.16	13.07	8.98
6	375004	Transcript	1	13.15	6.13	14.64	51.01	17.20	35.77	10.42
7	375003	Transcript	1	137.52	24.61	118.96	75.19	59.65	34.74	30.86
8	IG2_AR2	ActiveIntergenicRegion	0	8.37	55.80	5.29	144.11	16.57	86.17	25.59
9	ER1a	ExonRegion	0	6.47	0.88	12.40	4.99	11.26	1.53	6.43
10	E1a_E3a	KnownJunction	0	20.98	2.34	33.76	12.65	39.40	2.60	16.07
11	E1a_E4a	NovelJunction	0	4.57	2.39	5.65	10.16	15.33	3.06	1.09
12	ER2a	ExonRegion	0	0.77	0.49	0.68	10.97	9.15	3.19	0.67
13	ER2b	ExonRegion	0	1.31	2.07	1.15	13.80	3.45	7.24	1.30
14	E2_Da	KnownBoundary	0	2.59	6.20	1.32	17.15	1.18	11.82	2.21
15	E2a_E3a	KnownJunction	0	0.00	1.10	0.82	4.06	0.00	4.40	1.33
16	ER2c	ExonRegion	0	9.96	5.11	11.67	62.45	20.10	38.56	10.24
17	E2b_E3a	KnownJunction	1	13.95	1.34	16.27	79.40	31.51	59.01	13.72
18	E2b_E4a	NovelJunction	1	0.63	0.00	0.57	18.88	4.29	19.46	0.00
19	ER3a	ExonRegion	0	185.18	91.45	205.64	263.66	115.93	216.01	183.42
20	E3_Da	NovelBoundary	0	88.32	63.18	133.90	166.99	35.18	149.44	118.88
21	E3a_E4a	KnownJunction	0	15.54	11.93	15.98	11.16	0.00	9.73	7.32
22	E3b_E4a	KnownJunction	0	175.58	128.52	250.73	304.59	85.57	266.26	218.21
23	ER3b	ExonRegion	0	177.82	145.18	266.28	322.46	92.81	287.74	235.37
24	ER4a	ExonRegion	0	290.34	243.99	322.31	595.87	185.19	482.30	312.82
25	E4a_E5a	KnownJunction	0	366.79	304.46	383.43	661.46	207.29	524.77	424.61
26	ER5a	ExonRegion	0	342.35	310.31	405.22	678.47	213.50	545.65	394.68
27	E5a_E6a	KnownJunction	1	81.30	20.75	72.47	119.09	19.87	34.95	9.59
28	E5a_E7b	KnownJunction	0	242.34	279.90	310.72	525.81	182.56	494.08	357.23
29	I5	Intron	0	67.40	8.93	65.42	13.73	30.86	9.16	15.24
30	I5_AR1	ActiveIntronRegion	0	67.63	8.97	65.65	13.78	30.96	9.20	15.29
31	ER6a	ExonRegion	1	105.26	16.19	90.68	98.20	37.64	31.76	23.64
32	E6_Da	KnownBoundary	0	132.95	16.71	114.10	86.31	42.44	33.02	32.60
33	ER6b	ExonRegion	1	110.81	16.00	97.97	84.29	39.33	31.64	24.94
34	E6_Db	NovelBoundary	1	158.02	20.44	142.63	29.42	42.35	30.93	23.66
35	E7_Aa	NovelBoundary	1	92.88	10.01	56.33	30.99	31.95	12.19	8.03
36	ER7a	ExonRegion	1	137.52	24.61	118.96	75.19	59.65	34.74	30.86
37	E7_Ab	KnownBoundary	1	112.04	9.56	105.44	60.95	23.72	37.52	21.00
38	ER7b	ExonRegion	0	401.27	300.93	462.00	655.51	235.44	550.90	418.29
39	E7a_E8a	KnownJunction	0	367.76	256.88	400.70	629.54	238.11	477.12	315.99
40	ER8a	ExonRegion	0	627.58	286.14	611.79	705.45	327.04	549.25	382.75
41	E8a_E9a	KnownJunction	0	552.69	214.30	512.17	626.81	336.76	468.19	312.11
42	E8a_E10b	NovelJunction	1	2.50	3.86	6.16	25.87	0.95	17.04	2.25
43	E8a_E12a	NovelJunction	1	41.09	0.00	21.77	1.68	0.00	0.00	0.00
44	E9a_E9b	KnownJunction	0	301.25	132.93	285.87	340.21	141.91	257.33	153.03
45	E9_Ab	NovelBoundary	0	468.57	187.53	427.47	496.63	300.29	395.62	239.09
46	ER9a	ExonRegion	0	833.41	306.08	758.97	844.33	385.17	654.41	434.03
47	ER9b	ExonRegion	0	834.52	320.72	756.64	869.55	381.44	664.90	431.06
48	ER9c	ExonRegion	0	895.25	338.19	802.66	883.51	363.55	670.51	411.59
49	E9_Db	NovelBoundary	0	697.04	240.65	588.31	616.43	273.89	469.21	263.54
50	E9b_E9c	KnownJunction	0	380.80	128.78	315.07	345.98	134.01	242.19	147.51
51	E9c_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	E9c_E10b	KnownJunction	0	674.04	260.93	638.26	608.22	327.19	529.86	317.30
53	ER9d	ExonRegion	0	908.29	346.23	827.76	864.14	367.94	678.79	400.03
54	ER9e	ExonRegion	0	888.87	330.68	814.19	819.90	324.10	640.56	403.87
55	ER10a	ExonRegion	0	415.34	159.15	385.77	405.89	161.57	313.86	197.99
56	ER10b	ExonRegion	0	596.70	303.98	595.20	689.08	336.07	488.50	378.10
57	E10a_E11a	KnownJunction	0	419.62	303.96	450.84	624.02	347.34	463.45	410.06
58	ER11a	ExonRegion	0	403.13	292.47	476.58	632.31	253.26	415.22	411.35
59	E11a_E12a	KnownJunction	0	447.66	226.99	436.53	511.97	242.05	306.00	384.04
60	I11_AR2	ActiveIntronRegion	0	31.57	59.21	28.36	99.31	12.55	90.12	11.28
61	E12_Aa	NovelBoundary	0	39.59	105.80	24.36	263.16	19.18	247.47	10.15
62	ER12a	ExonRegion	0	460.92	333.37	511.20	774.31	342.87	584.33	477.49
63	E12a_E13a	KnownJunction	0	587.92	326.26	568.12	834.38	439.34	640.59	482.41
64	ER13a	ExonRegion	0	606.21	402.07	622.47	959.33	342.18	747.49	497.87
65	E13a_E14a	KnownJunction	0	374.62	347.28	384.25	703.15	271.15	615.51	357.44
66	ER14a	ExonRegion	0	492.08	361.64	498.85	817.59	261.08	667.94	439.01
67	E14a_E15a	KnownJunction	0	445.42	293.24	404.05	607.76	258.10	551.78	349.01
68	ER15a	ExonRegion	0	468.96	178.85	392.80	389.96	271.68	406.95	259.03
69	ER15b	ExonRegion	0	29.01	17.92	32.01	14.65	34.62	30.04	31.03
70	ER15c	ExonRegion	0	7.49	9.42	13.04	6.86	16.60	15.02	14.84
71	IG1_AR6	ActiveIntergenicRegion	0	11.53	1.82	5.05	0.06	2.94	4.12	1.96
72	IG1_SR5	SilentIntergenicRegion	0	20.13	4.23	19.36	3.08	5.98	3.94	6.79
73	IG1_AR5	ActiveIntergenicRegion	0	14.98	4.68	14.82	5.70	3.22	5.01	6.01
74	IG1_SR4	SilentIntergenicRegion	0	31.39	6.17	25.38	10.53	5.09	5.19	11.26
75	IG1_AR4	ActiveIntergenicRegion	0	17.16	7.36	18.63	9.60	4.34	6.65	9.19
76	IG1_AR2	ActiveIntergenicRegion	0	2.01	0.00	9.07	34.97	0.00	11.22	3.65
77	IG1_SR1	SilentIntergenicRegion	0	1.00	0.00	6.23	22.07	0.00	2.94	3.37
78	IG1_AR1	ActiveIntergenicRegion	0	0.56	0.00	3.23	12.43	0.00	1.88	1.51