Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SMYD3	Gene	0	22.36	9.13	6.72	2.74	58.45	4.01	62.41
2	403792	Transcript	0	2.95	0.39	1.54	0.17	6.48	0.20	3.15
3	327801	Transcript	0	0	0	0	0	0	0	0
4	388985	Transcript	0	0	0	0	0	0	0	0
5	366517	Transcript	0	0.40	0.09	0.05	0.00	0.25	0.00	0.55
6	391836	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	366516	Transcript	0	1.07	0.08	0.50	0.01	0.80	0.03	2.11
8	ER1a	ExonRegion	0	1.95	0.24	0.91	0.18	11.80	0.59	2.81
9	E1_Ab	KnownBoundary	0	6.36	1.08	3.85	1.03	49.89	1.53	10.02
10	ER1b	ExonRegion	0	9.52	7.48	4.10	4.51	33.35	6.26	12.15
11	E1a_E2a	KnownJunction	0	18.14	9.09	10.27	13.09	38.77	16.62	26.44
12	E2_Ab	NovelBoundary	0	16.39	8.28	9.01	5.88	36.35	8.44	59.96
13	ER2a	ExonRegion	0	20.91	12.32	12.05	11.22	49.17	16.46	41.92
14	ER2b	ExonRegion	0	30.61	18.76	12.83	8.55	111.24	11.25	78.29
15	E2a_E3a	KnownJunction	0	38.60	23.85	14.69	5.04	154.13	5.92	116.77
16	ER3a	ExonRegion	0	41.05	30.20	20.62	5.85	124.06	12.51	185.65
17	E3a_E4a	KnownJunction	0	47.90	34.68	22.35	5.96	95.16	7.77	153.16
18	ER4a	ExonRegion	0	53.38	35.61	19.87	7.57	110.96	9.51	147.63
19	E4a_E5a	KnownJunction	0	49.69	28.48	19.53	5.85	130.53	10.59	142.30
20	ER5a	ExonRegion	0	57.81	33.52	24.10	3.15	145.86	16.92	190.68
21	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	1.18	0.00	1.52
22	E5a_E10c	KnownJunction	0	47.98	23.78	12.09	3.06	107.54	9.89	157.55
23	ER6a	ExonRegion	0	6.91	0.95	3.70	0.33	6.47	0.00	5.13
24	I6_AR1	ActiveIntronRegion	0	12.38	0.42	5.85	0.00	8.73	0.00	5.54
25	I6_AR4	ActiveIntronRegion	0	10.51	0.98	4.56	0.00	11.57	0.00	6.35
26	I6_SR7	SilentIntronRegion	0	10.37	1.06	0.08	0.00	4.66	1.23	7.17
27	I6_AR8	ActiveIntronRegion	0	10.91	0.12	0.68	0.00	6.56	1.23	7.42
28	I6_SR8	SilentIntronRegion	0	10.50	1.21	0.68	0.00	7.15	1.23	7.42
29	I6_AR21	ActiveIntronRegion	0	10.73	2.75	2.79	1.17	8.38	0.00	11.58
30	I6_AR28	ActiveIntronRegion	0	10.35	1.20	3.97	0.00	10.67	0.46	8.65
31	I6_AR32	ActiveIntronRegion	0	10.34	0.42	4.10	0.00	6.59	0.00	5.16
32	I6_AR35	ActiveIntronRegion	0	8.09	3.40	2.73	0.37	11.80	3.68	10.41
33	I6_SR16	SilentIntronRegion	0	9.54	0.62	3.07	2.11	1.88	0.00	6.74
34	ER7a	ExonRegion	0	0.43	0.34	0.19	0.00	0.31	0.00	0.95
35	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER8a	ExonRegion	0	0.36	0.00	0.00	0.00	0.69	0.00	1.25
37	E8a_E10c	KnownJunction	0	0.82	0.00	0.00	0.00	0.00	0.00	0.00
38	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER10a	ExonRegion	0	1.17	0.00	0.28	0.00	0.26	0.00	1.64
40	ER10b	ExonRegion	0	1.34	0.00	0.51	0.00	5.87	0.00	6.24
41	ER10c	ExonRegion	0	0.97	0.15	0.72	0.02	1.34	0.05	2.58
42	E10_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	1.15
43	ER10d	ExonRegion	0	44.31	25.46	16.10	6.55	134.05	13.32	190.81
44	E10b_E11a	KnownJunction	0	34.90	37.04	15.92	9.56	158.60	19.32	187.80
45	ER11a	ExonRegion	0	39.01	29.78	10.52	7.46	126.70	8.44	160.65
46	E11a_E12a	KnownJunction	0	46.00	27.64	8.41	7.26	147.47	10.16	154.94
47	E11a_E13a	NovelJunction	0	1.55	4.44	2.37	3.93	8.90	5.95	10.78
48	ER12a	ExonRegion	0	64.11	23.94	11.85	7.46	187.45	8.48	173.58
49	E12a_E13a	KnownJunction	0	64.66	15.95	11.88	5.58	158.44	6.83	156.61
50	ER13a	ExonRegion	0	66.73	23.33	15.86	6.73	169.06	10.18	188.66
51	E13a_E14a	KnownJunction	0	79.68	30.42	15.19	10.00	187.07	9.73	171.49
52	ER14a	ExonRegion	0	74.22	17.53	15.47	8.43	212.56	6.98	170.81
53	E14a_E15a	KnownJunction	0	74.22	16.87	16.58	8.24	202.38	3.64	153.58
54	E14a_E16a	NovelJunction	0	1.25	0.00	0.00	0.00	13.49	3.78	1.79
55	ER15a	ExonRegion	0	85.62	17.26	18.82	8.64	181.78	8.48	196.62
56	E15a_E16a	KnownJunction	0	56.60	21.07	18.08	8.53	166.26	8.17	185.36
57	ER16a	ExonRegion	0	34.36	12.88	8.92	4.06	96.27	5.86	105.47
58	ER16b	ExonRegion	0	0.77	0.00	0.68	0.00	1.62	0.00	0.00
59	IG9_AR2	ActiveIntergenicRegion	0	1.33	0.07	1.07	0.54	0.52	0.26	13.73
60	IG9_SR1	SilentIntergenicRegion	0	0.73	0.58	1.26	0.00	0.43	0.00	15.47
61	IG9_AR1	ActiveIntergenicRegion	0	1.14	0.10	0.75	0.11	0.19	0.53	15.31