Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CD55	Gene	0	686.56	1338.82	1050.33	429.24	85.21	870.26	430.22
2	367067	Transcript	0	1.32	0.24	2.15	5.59	2.76	3.60	0.04
3	367064	Transcript	0	492.59	573.06	650.66	230.87	45.14	431.90	192.84
4	367063	Transcript	1	41.15	65.49	52.62	12.68	3.05	60.76	15.40
5	391920	Transcript	0	1.42	1.62	1.66	0.83	0.00	0.41	0.00
6	391921	Transcript	0	0	0	0	0	0	0	0
7	343420	Transcript	0	0	0	0	0	0	0	0
8	314754	Transcript	0	14.27	85.91	53.53	25.01	1.08	70.48	18.85
9	367065	Transcript	0	3.58	12.14	3.77	1.85	2.19	5.89	0.88
10	367062	Transcript	0	1.69	5.21	2.73	2.13	0.26	0.83	0.41
11	ER1a	ExonRegion	0	1.32	0.24	2.15	5.59	2.76	3.60	0.04
12	E1_Ab	KnownBoundary	0	3.37	0.00	2.50	4.04	0.00	7.93	0.00
13	ER1b	ExonRegion	0	8.68	49.45	12.36	36.67	7.84	38.17	15.41
14	E1_Ac	KnownBoundary	0	19.14	123.50	31.30	85.93	12.96	87.07	40.16
15	ER1c	ExonRegion	0	98.84	521.54	118.06	187.30	10.18	286.07	82.50
16	E1a_E3a	KnownJunction	0	199.46	1180.56	310.93	385.10	28.45	660.35	165.93
17	ER2a	ExonRegion	0	1.69	5.21	2.73	2.13	0.26	0.83	0.41
18	ER3a	ExonRegion	0	594.56	2975.74	1235.44	775.16	76.60	1645.32	600.24
19	E3a_E4a	KnownJunction	0	580.94	3240.21	1284.19	754.35	64.27	1733.44	674.77
20	E3a_E5a	KnownJunction	1	19.96	22.62	50.41	28.31	1.18	50.41	1.53
21	E3b_E4b	KnownJunction	1	0.00	36.75	3.25	3.33	6.45	8.25	4.77
22	ER3b	ExonRegion	0	0.00	1.21	0.68	1.25	0.00	3.68	0.00
23	E4_Ab	NovelBoundary	1	395.67	1.10	812.47	0.00	0.00	1.47	0.00
24	ER4a	ExonRegion	0	829.45	4232.08	1848.71	990.34	103.82	2301.44	865.64
25	ER4b	ExonRegion	0	1197.76	3464.88	2287.85	870.23	166.31	1980.50	890.13
26	E4a_E5a	KnownJunction	0	2307.52	3282.30	3464.47	837.11	271.95	2009.12	1076.50
27	ER5a	ExonRegion	0	2070.40	4052.39	3512.57	1172.89	224.04	2505.78	1270.92
28	E5a_E6a	KnownJunction	0	1731.88	3738.66	2957.65	1075.14	197.82	2265.89	986.03
29	ER6a	ExonRegion	0	2143.44	3805.67	3401.50	1197.24	263.63	2422.90	1328.07
30	E6a_E7a	KnownJunction	0	2354.55	3720.43	3480.05	1194.80	446.97	2444.25	1523.76
31	E6a_E8a	NovelJunction	0	21.80	78.37	33.74	33.70	0.00	47.11	1.26
32	ER7a	ExonRegion	0	1784.75	3630.80	2939.90	1195.11	276.69	2438.90	1521.61
33	E7a_E8a	KnownJunction	0	1835.26	3525.63	2659.52	1138.34	229.79	2217.39	1206.75
34	ER8a	ExonRegion	0	2109.15	3861.65	3191.14	1337.65	289.80	3005.85	1571.20
35	E8_Da	NovelBoundary	1	211.36	790.40	128.28	221.96	5.76	901.09	5.32
36	E8a_E9a	KnownJunction	0	1885.78	2656.07	2602.63	948.11	214.58	1795.75	1022.35
37	I8	Intron	0	66.79	173.35	44.34	83.07	2.79	195.63	1.22
38	I8_AR1	ActiveIntronRegion	0	67.31	174.69	44.69	83.70	2.81	197.12	1.23
39	E9_Aa	NovelBoundary	0	114.04	206.57	54.78	66.45	5.53	246.13	0.00
40	ER9a	ExonRegion	0	1601.53	2550.21	2135.86	893.70	220.64	1600.52	848.65
41	E9a_E14b	NovelJunction	1	55.23	4.23	5.20	2.47	0.00	8.47	0.89
42	E9b_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E9c_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	E9d_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	ER9b	ExonRegion	0	24.59	30.68	32.01	14.34	3.64	13.49	5.90
46	ER9c	ExonRegion	0	3.84	3.64	5.28	3.74	0.00	1.23	0.00
47	ER9d	ExonRegion	0	2.77	2.43	1.90	1.25	0.00	1.23	0.00
48	E10a_E11a	KnownJunction	0	61.54	238.96	150.50	92.16	9.68	189.69	58.41
49	E10a_E14b	KnownJunction	0	1123.55	1514.05	1146.64	519.72	180.71	781.13	545.88
50	ER10a	ExonRegion	0	1236.30	1917.74	1426.54	688.26	189.43	1083.43	630.10
51	ER11a	ExonRegion	0	69.90	246.74	129.07	77.75	9.18	162.54	61.97
52	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER11b	ExonRegion	0	74.66	287.45	136.47	75.01	13.83	164.47	61.13
54	ER11c	ExonRegion	0	63.25	282.61	144.54	76.71	12.91	192.43	51.69
55	E11_Db	KnownBoundary	0	58.82	167.43	90.95	43.35	21.83	120.49	35.87
56	E11b_E14b	KnownJunction	0	14.27	85.91	53.53	25.01	1.08	70.48	18.85
57	ER11d	ExonRegion	0	41.15	65.49	52.62	12.68	3.05	60.76	15.40
58	ER12a	ExonRegion	0	18.58	20.97	15.30	3.81	5.50	13.94	0.50
59	E12a_E14b	KnownJunction	0	2.89	13.90	3.42	2.68	1.15	9.49	0.00
60	ER13a	ExonRegion	0	1.49	2.43	3.08	1.25	0.00	0.00	0.00
61	ER14a	ExonRegion	0	154.65	216.85	160.88	75.13	26.22	111.57	74.21
62	ER14b	ExonRegion	0	1095.84	1698.01	1276.17	596.32	159.83	971.85	643.34
63	E14_Da	KnownBoundary	0	946.19	1615.88	1273.99	605.92	144.66	1059.13	616.55
64	ER14c	ExonRegion	0	1006.79	1704.06	1225.91	588.35	137.29	1038.10	515.82
65	E14_Db	KnownBoundary	0	1174.34	1551.93	1196.95	546.08	140.23	880.88	472.36
66	ER14d	ExonRegion	0	492.59	573.06	650.66	230.87	45.14	431.90	192.84
67	IG8_AR1	ActiveIntergenicRegion	0	17.97	8.95	27.38	6.55	0.29	9.54	2.20
68	IG8_SR1	SilentIntergenicRegion	0	26.04	9.70	28.61	5.52	0.49	10.44	1.23
69	IG8_AR2	ActiveIntergenicRegion	0	10.99	14.35	22.92	7.76	0.52	14.96	1.04