Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CAPN2	Gene	0	1233.21	2478.74	1226.85	2827.99	141.90	1614.33	1595.47
2	295006	Transcript	0	0.33	0.00	0.00	0.00	0.00	0.00	0.07
3	366869	Transcript	0	577.93	1603.23	686.14	1875.00	95.69	922.71	1163.63
4	ER1a	ExonRegion	0	173.09	1202.34	185.56	1112.49	16.21	733.47	420.23
5	E1a_E2a	KnownJunction	0	323.97	2792.76	421.38	2488.45	41.63	1718.67	810.18
6	E1a_E3a	NovelJunction	0	0.65	59.22	0.85	28.26	0.00	45.96	0.00
7	ER2a	ExonRegion	0	301.13	2572.20	385.50	2209.67	40.28	1501.46	792.31
8	E2a_E3a	KnownJunction	0	300.57	2371.79	395.07	2016.91	47.77	1410.90	781.95
9	ER3a	ExonRegion	1	437.37	3164.09	660.06	2767.37	53.42	1854.71	1256.96
10	E3a_E4a	KnownJunction	0	432.04	3198.49	639.45	2549.19	49.79	1803.03	1163.18
11	ER4a	ExonRegion	0	540.85	3130.83	731.70	2421.76	74.29	1513.54	1249.06
12	E4a_E5a	KnownJunction	0	675.96	3557.63	886.03	2882.63	84.05	1701.68	1546.68
13	ER5a	ExonRegion	0	696.66	3433.46	892.07	2746.37	85.04	1622.11	1497.38
14	E5a_E6a	KnownJunction	0	795.91	3167.68	894.28	2825.17	102.65	1627.87	1479.26
15	E5a_E7a	NovelJunction	1	0.00	9.33	7.46	63.15	0.00	55.26	1.49
16	ER6a	ExonRegion	0	685.54	2666.74	854.08	2504.00	113.82	1362.20	1450.16
17	E6a_E7a	KnownJunction	0	895.03	2372.76	1119.89	2470.36	135.00	1298.45	1527.27
18	ER7a	ExonRegion	0	962.05	2698.34	1201.88	2814.32	122.71	1544.41	1673.92
19	E7a_E8a	KnownJunction	0	848.18	2913.29	998.01	3072.94	114.78	1627.76	1659.05
20	ER8a	ExonRegion	0	949.53	3173.53	1173.41	3339.13	132.65	1755.22	1970.26
21	E8a_E9a	KnownJunction	0	1125.35	3697.55	1555.78	3925.07	147.10	2290.76	2342.94
22	ER9a	ExonRegion	0	988.33	3182.29	1234.07	3429.39	139.87	1886.75	2002.20
23	E9a_E10a	KnownJunction	0	740.15	2298.65	876.12	2628.92	127.67	1338.78	1522.40
24	ER10a	ExonRegion	0	660.26	2178.20	767.96	2441.00	105.01	1274.94	1425.10
25	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E10a_E12a	KnownJunction	0	568.09	1439.25	589.92	1617.88	81.81	927.06	1061.53
27	E11a_E13a	KnownJunction	0	0.62	0.00	0.00	0.00	0.00	0.00	0.00
28	ER11a	ExonRegion	0	0.38	0.00	0.00	0.00	0.00	0.00	0.22
29	E12a_E13a	KnownJunction	0	375.54	1214.87	515.81	1472.24	83.77	581.77	812.81
30	ER12a	ExonRegion	0	790.14	2155.56	952.68	2534.87	121.48	1259.30	1616.55
31	ER13a	ExonRegion	0	999.91	2476.90	1135.23	2932.78	136.62	1572.50	1705.33
32	E13a_E14a	KnownJunction	0	1070.89	2297.54	1114.22	2774.02	199.89	1449.68	1399.02
33	ER14a	ExonRegion	0	1557.70	2890.97	1453.96	3536.42	234.29	1736.01	1988.75
34	E14a_E15a	KnownJunction	0	1389.59	2354.53	1146.77	2945.53	224.14	1398.17	1724.73
35	ER15a	ExonRegion	0	1449.13	3007.05	1461.22	3761.27	186.67	1950.64	2446.60
36	E15a_E16a	KnownJunction	0	1231.43	2786.69	1294.45	3472.37	164.87	1708.89	2183.29
37	ER16a	ExonRegion	0	1711.15	2754.90	1490.14	3280.37	179.26	1482.89	1964.86
38	E16a_E17a	KnownJunction	0	1986.72	2431.63	1479.05	2985.20	192.84	1280.84	1722.84
39	ER17a	ExonRegion	0	2541.27	2667.38	1780.31	3382.24	315.80	1605.77	2290.72
40	E17a_E18a	KnownJunction	0	2786.00	2667.68	1923.25	3651.61	369.42	1798.18	2593.46
41	ER18a	ExonRegion	0	3225.42	3015.98	2325.89	4037.72	358.73	2006.16	2605.13
42	E18a_E19a	KnownJunction	1	3800.38	3072.29	2527.66	4074.72	343.95	2112.38	2118.04
43	ER19a	ExonRegion	1	3559.01	2961.53	2463.83	3992.73	345.69	2056.77	2312.80
44	E19a_E20a	KnownJunction	0	2925.26	2440.09	2162.30	3378.64	339.20	1762.30	2273.79
45	ER20a	ExonRegion	0	2801.72	2341.27	2146.35	3191.04	296.16	1663.26	1905.76
46	E20a_E21a	KnownJunction	0	2488.47	2369.63	2013.54	3204.04	216.90	1585.31	1767.72
47	ER21a	ExonRegion	0	2570.56	2490.68	2243.33	3361.11	255.30	1848.30	2034.65
48	E21a_E22a	KnownJunction	0	2421.14	2283.46	2223.41	3003.59	292.47	1853.04	1916.77
49	ER22a	ExonRegion	0	1493.97	2306.56	1547.88	3078.23	157.76	1853.50	1747.12
50	IG40	Intergenic	0	9.87	10.01	11.73	15.51	1.19	10.42	5.76
51	IG40_AR1	ActiveIntergenicRegion	0	17.16	32.43	25.30	45.93	1.61	40.86	17.66
52	IG40_SR1	SilentIntergenicRegion	0	12.29	6.17	11.74	8.77	0.62	7.41	5.15
53	IG40_SR2	SilentIntergenicRegion	0	8.78	7.79	10.15	12.66	1.21	7.17	4.44