Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TROVE2	Gene	0	67.74	77.88	81.91	55.67	90.93	89.55	75.32
2	400968	Transcript	0	3.14	10.15	3.83	7.06	6.22	7.20	9.21
3	400969	Transcript	0	0	0	0	0	0	0	0
4	367446	Transcript	0	80.95	77.30	98.69	52.75	112.55	100.94	81.11
5	367445	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.63
6	367444	Transcript	0	0.00	5.96	0.00	1.63	0.00	4.05	1.25
7	367443	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	367441	Transcript	0	0.73	1.92	0.86	1.71	0.43	3.68	2.20
9	ER1a	ExonRegion	1	5.38	17.88	7.05	14.11	11.37	14.39	17.57
10	E1a_E3b	NovelJunction	1	12.70	29.58	5.00	3.20	13.51	7.32	10.05
11	E1a_E4a	NovelJunction	0	3.07	14.16	5.35	11.62	1.04	8.04	4.70
12	E1a_E5a	KnownJunction	0	0.90	2.42	0.60	0.00	1.06	0.00	0.85
13	ER2a	ExonRegion	0	6.40	27.60	5.65	15.60	2.60	25.69	6.14
14	E2_Ab	KnownBoundary	0	11.92	45.16	9.27	17.15	7.98	59.50	9.03
15	ER2b	ExonRegion	0	9.12	43.87	7.20	23.81	7.55	61.85	8.28
16	E2a_E3b	KnownJunction	1	9.76	27.64	9.94	11.68	4.63	75.63	10.96
17	E2a_E4a	NovelJunction	0	0.00	11.85	2.10	10.13	1.04	28.01	0.80
18	ER3a	ExonRegion	0	0.73	1.92	0.86	1.71	0.43	3.68	2.20
19	ER3b	ExonRegion	0	61.10	94.78	62.01	66.40	79.76	100.16	72.06
20	E3a_E4a	KnownJunction	0	44.09	78.29	39.07	54.62	67.89	77.61	71.64
21	ER4a	ExonRegion	0	73.23	98.82	91.01	67.77	85.44	88.93	89.82
22	E4a_E5a	KnownJunction	0	103.34	107.82	137.24	92.84	113.97	121.22	92.88
23	ER5a	ExonRegion	0	117.87	124.42	149.73	93.94	106.72	137.75	114.30
24	E5a_E6a	KnownJunction	0	123.34	128.31	176.11	80.16	137.39	138.80	110.55
25	ER6a	ExonRegion	0	103.64	113.88	136.92	83.23	123.73	101.62	116.53
26	E6a_E7a	KnownJunction	0	77.56	120.24	123.21	71.66	104.11	111.38	103.62
27	ER7a	ExonRegion	0	97.02	139.98	129.87	113.18	133.02	127.50	136.74
28	E7a_E8a	KnownJunction	0	79.43	171.53	108.87	111.34	163.35	131.10	126.25
29	ER8a	ExonRegion	0	97.18	183.42	148.31	126.33	150.41	169.28	151.48
30	E8a_E9a	KnownJunction	0	94.20	192.57	122.06	135.81	153.95	171.17	145.06
31	ER9a	ExonRegion	0	91.02	183.61	129.45	123.21	181.88	181.91	142.72
32	E9a_E10a	KnownJunction	0	112.29	156.60	159.86	111.75	272.55	188.16	154.05
33	ER10a	ExonRegion	0	157.55	178.25	192.08	129.15	177.11	218.03	185.39
34	E10_Da	KnownBoundary	1	73.00	133.17	102.92	116.14	108.19	200.94	123.75
35	E10a_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	E10a_E11a	KnownJunction	0	0.00	5.96	0.00	1.63	0.00	4.05	1.25
37	ER10b	ExonRegion	0	76.84	139.68	108.91	124.94	102.20	192.72	134.38
38	E10_Db	KnownBoundary	1	61.24	107.87	79.05	90.97	107.68	132.66	99.99
39	E10b_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.63
40	ER10c	ExonRegion	0	99.44	110.73	128.47	87.01	153.73	124.33	119.97
41	E10_Dc	KnownBoundary	0	44.16	64.34	66.23	59.03	62.04	89.91	48.55
42	ER10d	ExonRegion	0	91.14	85.08	112.73	60.43	124.16	118.34	79.60
43	E10_Dd	KnownBoundary	0	49.37	43.03	50.55	38.63	83.04	63.62	39.77
44	E10d_E10b	NovelJunction	0	21.20	19.41	24.60	23.16	0.00	13.24	11.51
45	E10_Ab	KnownBoundary	0	42.38	70.07	56.14	33.70	72.09	69.12	54.42
46	ER10e	ExonRegion	0	92.06	112.01	116.17	75.07	130.31	134.86	99.84
47	ER10f	ExonRegion	0	102.14	112.89	123.49	77.89	110.89	148.91	101.14
48	ER10g	ExonRegion	0	115.18	122.51	141.00	78.66	98.38	157.48	115.11
49	E10_Df	KnownBoundary	0	119.92	101.59	136.59	70.38	101.99	146.51	98.73
50	E10f_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER10h	ExonRegion	0	69.84	42.60	81.22	30.43	94.80	67.02	62.38
52	E10_Dg	NovelBoundary	0	53.83	24.46	59.08	9.73	149.82	23.64	48.30
53	I10	Intron	1	51.94	22.59	64.77	23.82	138.01	29.19	65.46
54	I10_AR1	ActiveIntronRegion	0	64.48	21.25	64.59	8.51	135.25	20.06	45.00
55	I10_AR2	ActiveIntronRegion	1	42.52	16.76	58.08	11.36	81.27	16.27	49.69
56	I10_SR1	SilentIntronRegion	1	21.08	11.22	35.58	9.58	63.26	6.98	34.63
57	I10_AR3	ActiveIntronRegion	1	57.60	25.96	69.62	30.84	168.04	36.68	75.23
58	E11_Aa	NovelBoundary	0	47.75	31.76	53.76	38.09	225.92	44.76	65.95
59	ER11a	ExonRegion	0	23.23	15.85	17.86	16.25	64.73	25.21	29.44
60	IG36	Intergenic	0	16.50	9.61	14.36	3.41	9.33	3.42	12.74
61	IG36_AR1	ActiveIntergenicRegion	0	20.53	8.04	15.30	3.25	10.61	1.53	10.13
62	IG36_SR1	SilentIntergenicRegion	0	17.11	10.94	13.85	4.66	8.06	7.53	13.82
63	IG36_AR2	ActiveIntergenicRegion	0	22.19	15.41	19.91	4.26	16.41	3.79	21.70
64	IG36_SR2	SilentIntergenicRegion	0	9.50	7.68	11.30	2.36	5.71	2.39	10.57