Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	IVNS1ABP	Gene	0	364.17	252.68	288.69	342.31	799.40	381.24	164.50
2	367496	Transcript	0	0.00	5.16	0.25	6.23	0.10	4.75	0.00
3	392007	Transcript	1	48.84	22.00	22.81	33.25	18.09	31.06	6.90
4	367498	Transcript	0	410.60	372.18	362.02	536.38	1294.58	584.51	266.86
5	367497	Transcript	1	54.75	27.51	52.28	34.02	9.06	19.41	4.20
6	ER1a	ExonRegion	0	0.00	5.16	0.25	6.23	0.10	4.75	0.00
7	ER1b	ExonRegion	0	77.98	153.59	73.25	196.64	192.09	212.23	57.14
8	E1a_E2a	KnownJunction	0	259.33	460.83	243.63	483.12	696.40	635.05	171.09
9	ER2a	ExonRegion	0	428.85	468.13	397.43	519.36	581.25	674.22	196.97
10	E2_Ab	KnownBoundary	0	666.26	389.42	592.58	559.81	1135.10	683.05	221.65
11	ER2b	ExonRegion	0	751.07	393.69	649.97	531.32	1025.70	602.62	217.13
12	E2a_E3a	KnownJunction	1	799.93	370.72	661.68	460.36	945.58	486.79	179.07
13	ER3a	ExonRegion	0	783.80	319.68	606.93	418.68	979.39	468.62	190.18
14	E3a_E4a	KnownJunction	1	796.58	271.07	546.66	358.82	1119.93	365.01	172.74
15	E3a_E5a	NovelJunction	0	4.91	5.02	5.91	9.54	3.04	14.12	2.98
16	E4_Aa	NovelBoundary	1	406.23	7.75	293.69	12.30	3.39	5.49	4.30
17	ER4a	ExonRegion	1	926.07	358.33	618.50	461.91	1282.51	397.12	203.22
18	E4a_E5a	KnownJunction	0	1013.90	348.20	617.41	545.80	1758.82	483.90	241.99
19	ER5a	ExonRegion	1	1152.60	411.55	671.53	595.13	1696.48	573.23	251.37
20	E5a_E6a	KnownJunction	0	1.75	0.00	4.40	1.22	0.00	4.13	1.50
21	E5a_E7a	KnownJunction	1	1266.65	435.90	672.59	606.62	1963.57	604.66	250.64
22	ER6a	ExonRegion	0	20.30	14.86	28.30	18.95	3.19	7.31	3.32
23	E6_Da	KnownBoundary	0	42.78	32.39	54.45	29.56	8.58	13.56	3.98
24	ER6b	ExonRegion	0	54.75	27.51	52.28	34.02	9.06	19.41	4.20
25	ER7a	ExonRegion	0	977.91	410.87	640.84	469.03	1523.26	480.28	251.31
26	E7a_E8a	KnownJunction	0	763.38	360.13	576.78	402.93	1777.67	431.15	237.20
27	ER8a	ExonRegion	0	446.44	312.39	400.32	335.88	1323.58	363.30	275.05
28	E8_Da	NovelBoundary	1	46.88	29.35	93.38	61.39	9.68	26.34	8.31
29	E8a_E10a	KnownJunction	1	90.24	110.29	140.07	39.09	1048.86	83.70	253.57
30	I8	Intron	1	55.61	25.28	91.66	53.92	6.83	19.56	2.27
31	I8_AR1	ActiveIntronRegion	1	55.76	25.35	91.90	54.05	6.85	19.61	2.27
32	ER9a	ExonRegion	0	48.84	22.00	22.81	33.25	18.09	31.06	6.90
33	I9	Intron	1	166.45	78.01	157.36	134.52	31.27	91.18	22.74
34	I9_AR1	ActiveIntronRegion	1	166.79	78.14	157.68	134.76	31.33	91.34	22.78
35	E10_Aa	NovelBoundary	1	206.59	98.15	154.08	250.35	42.56	139.92	24.87
36	ER10a	ExonRegion	0	344.64	305.65	317.47	370.17	1084.16	395.60	304.80
37	E10_Da	NovelBoundary	0	126.89	103.80	148.33	141.69	34.51	114.76	34.28
38	E10a_E11a	KnownJunction	0	412.44	288.49	309.51	394.34	1214.56	480.73	315.32
39	I10	Intron	1	125.48	48.00	130.25	87.84	24.34	58.21	14.20
40	I10_AR1	ActiveIntronRegion	1	121.67	55.06	130.82	73.83	18.34	70.16	14.72
41	I10_SR1	SilentIntronRegion	1	105.07	23.81	114.19	50.35	12.19	36.28	6.08
42	I10_AR2	ActiveIntronRegion	1	127.45	47.25	130.89	93.18	26.45	56.08	14.43
43	E11_Aa	NovelBoundary	1	265.32	89.45	247.31	173.36	41.33	89.51	22.33
44	ER11a	ExonRegion	0	418.47	377.04	378.93	515.97	1326.27	563.38	336.95
45	E11_Da	NovelBoundary	1	52.57	27.03	75.99	25.14	12.29	37.87	4.24
46	E11a_E12a	KnownJunction	0	334.50	331.73	347.20	530.28	1418.23	566.79	295.77
47	ER12a	ExonRegion	0	415.05	437.52	438.85	581.03	1305.32	609.89	315.00
48	E12a_E13a	KnownJunction	0	363.11	413.80	341.67	556.72	1264.22	510.32	252.98
49	ER13a	ExonRegion	0	463.01	423.86	473.70	631.75	1377.28	666.40	295.87
50	E13a_E14a	KnownJunction	0	427.61	282.23	337.93	551.49	1382.25	551.51	202.75
51	ER14a	ExonRegion	0	430.88	392.99	385.99	626.85	1416.56	652.70	252.66
52	E14a_E15a	KnownJunction	0	419.50	474.88	398.93	699.90	1625.64	752.72	287.77
53	ER15a	ExonRegion	0	569.62	510.04	499.09	701.16	1531.98	812.79	301.88
54	E15a_E16a	KnownJunction	0	479.39	466.45	404.83	622.77	1304.35	724.88	249.11
55	ER16a	ExonRegion	0	585.77	488.24	445.84	723.31	1665.89	817.63	264.01
56	E16a_E17a	KnownJunction	0	574.99	493.67	392.40	805.99	1175.05	884.26	224.42
57	ER17a	ExonRegion	0	240.44	158.05	179.95	231.29	572.61	278.83	116.88
58	IG46	Intergenic	0	27.75	14.39	22.81	28.93	5.32	30.23	5.89
59	IG46_SR5	SilentIntergenicRegion	0	17.51	10.90	18.94	19.67	5.29	16.37	3.18
60	IG46_AR7	ActiveIntergenicRegion	0	14.34	3.44	17.05	9.98	2.29	8.79	1.35
61	IG46_SR3	SilentIntergenicRegion	0	37.82	11.51	28.90	26.91	5.61	30.97	7.07
62	IG46_AR6	ActiveIntergenicRegion	0	24.37	15.45	19.08	32.70	3.92	23.46	5.52
63	IG46_AR5	ActiveIntergenicRegion	0	31.82	18.51	26.14	35.57	6.61	37.67	7.18
64	IG46_AR3	ActiveIntergenicRegion	0	3.06	6.51	6.84	8.80	1.44	3.09	1.77
65	IG46_AR2	ActiveIntergenicRegion	0	19.33	7.69	15.13	14.17	3.69	27.89	0.85
66	IG46_AR1	ActiveIntergenicRegion	0	19.07	16.43	16.78	32.47	4.22	36.55	5.88