Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 AGRN Gene 0 180.58 247.64 60.61 142.12 195.92 23.45 842.41 2 379370 Transcript 0 202.37 351.59 64.29 190.56 271.14 41.04 1147.40 3 379364 Transcript 0 1.15 5.15 0.08 3.60 45.93 0.51 2.67 4 ER1a ExonRegion 0 25.22 70.93 8.32 39.27 18.44 8.16 160.14 5 E1a_E2a KnownJunction 0 74.20 195.67 26.61 119.50 56.73 22.19 504.09 6 ER2a ExonRegion 0 129.53 267.13 49.52 132.22 110.15 29.79 744.82 7 E2a_E3a KnownJunction 0 138.58 200.82 54.12 111.24 123.33 20.15 774.43 8 ER3a ExonRegion 0 132.60 188.43 49.58 99.16 152.52 24.57 773.88 9 E3a_E4a KnownJunction 1 99.09 132.01 37.35 67.02 155.81 21.73 621.35 10 E3a_E8a NovelJunction 0 2.69 10.17 2.73 19.80 0.00 1.47 27.50 11 ER4a ExonRegion 0 75.21 139.85 24.37 62.89 73.53 12.36 464.75 12 E4a_E5a KnownJunction 0 55.76 151.93 14.28 64.34 43.13 11.28 394.37 13 ER5a ExonRegion 0 39.25 137.28 14.04 61.00 50.95 8.94 352.57 14 E5a_E6a KnownJunction 0 72.10 137.16 24.10 62.34 57.24 12.92 370.07 15 ER6a ExonRegion 0 109.63 143.45 33.65 69.95 81.96 13.07 399.71 16 E6a_E7a KnownJunction 0 95.92 133.64 36.33 56.43 88.29 11.34 445.29 17 ER7a ExonRegion 0 80.32 166.10 26.48 77.19 100.43 11.91 506.93 18 E7a_E8a KnownJunction 0 125.84 243.22 39.46 107.47 136.22 11.74 918.40 19 ER8a ExonRegion 0 126.27 275.84 40.89 135.77 196.22 17.63 992.42 20 E8a_E9a KnownJunction 0 185.27 286.81 58.37 159.00 319.05 22.78 1339.31 21 ER9a ExonRegion 0 176.50 293.24 58.36 160.83 204.68 19.55 1263.49 22 E9a_E10a KnownJunction 0 145.87 250.29 54.22 133.50 163.40 19.67 1068.74 23 ER10a ExonRegion 0 123.05 227.86 44.35 133.96 164.17 13.39 875.29 24 E10a_E11a KnownJunction 0 163.74 232.66 57.90 145.10 209.50 18.89 834.23 25 ER11a ExonRegion 0 176.06 297.85 64.62 162.75 173.47 18.32 967.90 26 E11a_E12a KnownJunction 0 216.25 287.57 88.46 179.42 194.89 24.60 1127.35 27 ER12a ExonRegion 0 224.41 305.71 83.38 178.00 202.97 26.95 1271.07 28 E12a_E13a KnownJunction 0 177.13 272.72 67.87 167.67 173.77 16.35 938.71 29 ER13a ExonRegion 0 123.53 216.64 50.15 135.10 130.34 16.80 754.72 30 E13a_E14a KnownJunction 0 188.41 253.47 75.67 153.15 164.94 25.25 1094.13 31 ER14a ExonRegion 0 98.51 242.24 45.77 159.60 129.89 13.23 691.16 32 E14a_E15a KnownJunction 0 147.17 282.18 60.38 189.56 119.64 21.82 1034.31 33 ER15a ExonRegion 0 178.00 279.31 71.77 189.12 185.88 19.68 1072.90 34 E15a_E16a KnownJunction 0 212.05 277.16 79.42 186.03 235.72 27.31 1188.20 35 ER16a ExonRegion 0 230.32 347.33 111.77 223.39 279.30 25.89 1575.92 36 E16a_E17a KnownJunction 0 201.75 333.49 113.28 248.45 226.19 32.29 1431.26 37 ER17a ExonRegion 0 212.36 326.64 92.99 220.35 172.83 25.56 1338.11 38 E17a_E18a KnownJunction 0 212.71 293.43 89.28 205.11 250.70 24.71 1515.79 39 ER18a ExonRegion 0 119.30 214.99 54.25 127.33 144.81 24.73 667.68 40 E18a_E19a KnownJunction 0 119.70 230.37 54.62 145.40 103.83 13.24 648.51 41 ER19a ExonRegion 0 165.69 275.40 67.16 166.11 160.73 21.37 755.28 42 E19a_E20a KnownJunction 0 208.36 275.80 92.16 169.13 230.97 32.96 926.71 43 ER20a ExonRegion 0 210.07 330.21 92.97 194.71 165.03 25.88 997.83 44 E20a_E21a KnownJunction 0 178.38 317.31 75.76 153.90 197.38 29.99 848.49 45 ER21a ExonRegion 0 233.79 300.71 96.16 168.03 241.88 37.96 1024.14 46 E21a_E22a KnownJunction 0 205.55 237.36 76.64 136.46 211.72 39.88 958.83 47 ER22a ExonRegion 0 213.70 238.30 79.44 165.18 159.97 24.56 1010.50 48 E22a_E23a KnownJunction 0 206.50 291.30 66.28 163.74 100.93 25.81 1063.72 49 ER23a ExonRegion 0 80.24 150.63 26.58 91.70 82.76 12.62 429.34 50 E23a_E24a KnownJunction 0 153.88 172.81 47.49 96.25 84.79 12.57 481.65 51 ER24a ExonRegion 0 176.98 196.27 55.56 135.66 137.81 17.60 611.28 52 E24a_E25a KnownJunction 0 221.29 206.26 77.38 134.48 187.97 22.67 696.19 53 ER25a ExonRegion 0 139.54 212.39 44.56 117.09 119.24 19.45 560.03 54 E25a_E26a KnownJunction 0 128.88 190.23 54.03 115.62 141.27 15.22 584.44 55 ER26a ExonRegion 0 84.25 156.15 34.79 84.88 105.43 14.89 471.34 56 E26a_E27a KnownJunction 0 103.96 180.43 41.34 101.10 127.60 16.19 648.21 57 ER27a ExonRegion 0 112.84 202.47 39.81 115.66 115.28 18.01 547.88 58 E27a_E28a KnownJunction 0 155.27 242.75 46.78 186.28 92.88 18.33 677.40 59 ER28a ExonRegion 0 126.77 266.12 41.56 180.60 135.86 18.38 660.32 60 E28a_E29a KnownJunction 0 171.27 265.84 49.55 156.53 204.04 21.60 759.35 61 ER29a ExonRegion 0 205.69 253.43 56.99 160.33 210.70 25.78 757.51 62 E29a_E30a KnownJunction 0 214.72 251.94 63.88 152.04 182.46 26.67 819.00 63 ER30a ExonRegion 0 202.62 258.37 54.66 129.61 217.97 28.49 796.55 64 E30a_E31a KnownJunction 0 3.77 11.45 0.00 1.68 109.29 1.31 4.56 65 E30a_E32a KnownJunction 0 169.69 233.89 46.78 122.91 85.76 36.53 781.31 66 E31a_E32a KnownJunction 0 1.95 8.01 0.00 4.71 73.61 0.00 3.14 67 ER31a ExonRegion 0 3.39 15.29 0.00 4.99 133.83 1.23 7.48 68 ER32a ExonRegion 0 129.56 243.68 41.60 132.16 186.96 24.76 676.52 69 E32a_E33a KnownJunction 0 137.51 215.27 39.20 116.36 159.55 13.24 696.15 70 E32a_E34a NovelJunction 0 0.82 4.02 0.89 13.11 3.32 1.02 9.50 71 ER33a ExonRegion 0 121.14 278.65 45.09 153.38 201.44 24.40 683.73 72 E33a_E34a KnownJunction 0 187.46 363.20 78.74 175.74 316.05 30.18 1212.68 73 ER34a ExonRegion 0 208.99 417.90 90.08 226.30 383.20 39.44 1443.12 74 E34a_E35a KnownJunction 0 0.00 1.47 0.60 4.09 26.95 1.07 4.14 75 E34a_E37a KnownJunction 0 235.06 469.29 81.81 258.21 456.52 45.56 1513.50 76 E35a_E36a KnownJunction 0 0.00 0.00 0.00 0.00 2.26 0.00 0.00 77 ER35a ExonRegion 0 0.00 0.40 0.00 1.35 11.14 0.46 0.82 78 I35_SR1 SilentIntronRegion 0 7.17 5.34 2.59 6.33 44.38 0.00 49.14 79 ER36a ExonRegion 0 0.07 1.33 0.00 4.12 3.90 0.00 0.61 80 E36a_E37a KnownJunction 0 0.00 3.26 0.00 7.83 6.48 0.00 0.59 81 ER37a ExonRegion 0 230.91 439.20 94.36 239.46 363.17 38.81 1482.67 82 E37a_E38a KnownJunction 0 257.86 388.03 112.59 231.74 506.72 41.30 1465.90 83 ER38a ExonRegion 0 168.58 304.19 68.56 170.16 337.65 28.28 976.78 84 E38a_E39a KnownJunction 0 151.34 258.22 59.75 131.74 150.21 18.97 702.48 85 ER39a ExonRegion 0 396.63 324.46 109.26 190.39 398.46 39.87 1272.35 86 IG44_AR2 ActiveIntergenicRegion 0 5.52 10.66 0.33 2.20 2.38 4.02 0.33 87 IG44_AR6 ActiveIntergenicRegion 0 8.30 9.09 2.79 1.45 0.45 0.00 1.86 88 IG44_AR7 ActiveIntergenicRegion 0 8.29 7.57 2.24 1.14 0.43 0.00 0.47