Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 AL627309.15 Gene 0 4.69 5.98 3.46 4.47 2.94 4.58 4.83 2 326632 Transcript 0 4.11 5.77 2.60 4.36 1.15 3.81 3.81 3 ER1a ExonRegion 0 1.90 0.00 2.13 0.00 7.36 2.05 2.40 4 E1a_E2a KnownJunction 0 1.87 0.00 1.48 0.00 1.18 0.00 0.00 5 ER2a ExonRegion 0 5.06 7.55 4.89 6.48 5.79 4.39 7.38 6 E2_Da NovelBoundary 0 9.58 17.42 5.42 5.09 1.06 0.00 14.79 7 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER3a ExonRegion 0 6.85 6.39 2.94 3.80 4.31 2.89 9.18 9 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER4a ExonRegion 0 13.48 5.93 10.95 7.56 5.51 8.01 12.36 11 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER5a ExonRegion 0 14.35 25.49 8.88 16.84 2.14 20.02 14.74 13 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER6a ExonRegion 0 10.47 6.85 6.33 5.35 1.29 6.04 7.48 15 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER7a ExonRegion 0 0.29 10.23 0.78 6.25 0.20 4.09 0.26 17 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER8a ExonRegion 0 0.00 8.71 0.00 8.45 0.00 4.29 0.00 20 ER9a ExonRegion 0 0.00 0.78 0.00 0.83 0.00 0.27 0.00 21 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 I9 Intron 0 5.87 10.76 7.19 6.60 3.24 5.36 10.15 23 I9_AR1 ActiveIntronRegion 0 5.88 10.79 7.22 6.62 3.25 5.38 10.18 24 E10_Aa NovelBoundary 0 2.07 12.37 4.11 12.65 0.00 4.66 3.97 25 ER10a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E10a_E11a KnownJunction 0 48.53 72.35 26.71 53.40 1.06 43.12 41.36 27 E11_Aa NovelBoundary 0 18.26 18.00 17.03 20.70 3.34 8.20 11.87 28 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E12_Da NovelBoundary 0 68.06 100.88 68.04 58.57 18.70 54.40 82.16 32 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E13_Aa NovelBoundary 0 62.24 70.49 38.34 66.59 27.62 66.70 78.72 34 ER13a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00