Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MAD2L2	Gene	0	33.77	30.46	116.06	38.19	437.99	40.84	85.42
2	235310	Transcript	0	0.28	0.04	3.26	0.76	2.02	0.12	0.21
3	376667	Transcript	0	0	0	0	0	0	0	0
4	376655	Transcript	0	1.02	0.69	2.16	2.06	15.66	0.86	3.02
5	376672	Transcript	0	0	0	0	0	0	0	0
6	376664	Transcript	1	3.64	1.59	8.83	4.81	29.47	10.66	1.96
7	376692	Transcript	0	0	0	0	0	0	0	0
8	376669	Transcript	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.06	0.00	0.00
10	E1_Ab	KnownBoundary	0	0.00	1.23	0.00	0.00	0.00	0.00	0.00
11	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	4.75	0.00	0.00
12	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	2.73	0.00	0.00
13	ER1c	ExonRegion	0	0.93	1.09	4.29	1.00	48.54	0.00	0.45
14	E1_Ad	KnownBoundary	0	3.62	3.63	15.36	2.90	110.70	0.00	1.42
15	ER1d	ExonRegion	0	1.81	2.24	6.86	1.81	83.64	0.21	1.57
16	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E1a_E4a	KnownJunction	0	2.69	0.00	7.19	1.68	53.23	0.00	3.57
18	ER2a	ExonRegion	0	1.05	0.00	6.85	0.97	6.46	0.00	0.37
19	E2a_E3a	KnownJunction	0	0.00	0.00	6.97	1.19	0.00	0.00	0.00
20	ER3a	ExonRegion	0	0.36	0.21	2.48	1.61	3.60	0.58	0.67
21	E3_Ab	KnownBoundary	0	10.11	7.33	16.02	7.07	39.03	5.41	12.97
22	ER3b	ExonRegion	0	8.25	15.10	16.38	35.68	47.55	25.15	27.45
23	E3a_E4a	KnownJunction	0	13.40	14.34	29.29	16.74	52.08	20.10	38.22
24	E4_Aa	NovelBoundary	1	5.61	4.47	16.84	4.39	73.61	17.21	6.76
25	ER4a	ExonRegion	0	18.41	34.04	76.35	32.40	318.69	34.16	68.03
26	E4a_E5a	KnownJunction	0	19.49	57.25	109.95	42.67	406.38	48.56	91.12
27	ER5a	ExonRegion	0	54.16	81.31	255.14	105.80	867.47	105.27	215.99
28	E5a_E6a	KnownJunction	1	50.85	110.66	335.04	111.02	2016.16	106.42	294.40
29	E5a_E6b	KnownJunction	1	0.00	0.00	2.41	2.87	0.00	9.81	0.00
30	ER6a	ExonRegion	0	80.60	129.80	422.90	116.16	1784.37	115.75	338.55
31	E6_Da	KnownBoundary	0	1.00	0.00	0.85	2.63	22.29	1.29	2.09
32	E6a_E6b	KnownJunction	0	103.46	144.83	487.27	127.68	1127.40	135.93	382.51
33	ER6b	ExonRegion	0	1.02	0.69	2.16	2.06	15.66	0.86	3.02
34	E6_Ab	KnownBoundary	0	4.14	0.00	2.83	1.03	11.34	0.00	2.98
35	ER6c	ExonRegion	0	96.11	127.88	455.07	139.74	1513.89	171.20	350.44
36	E6_Db	KnownBoundary	0	68.50	87.83	305.82	92.54	1741.78	106.07	226.62
37	E6_Dc	KnownBoundary	0	0.87	1.23	4.99	6.66	18.83	10.99	4.69
38	E6c_E7a	KnownJunction	0	93.48	82.05	391.61	116.11	1506.46	124.51	283.60
39	ER6d	ExonRegion	0	94.17	102.91	399.97	128.33	1792.20	139.66	290.69
40	ER6e	ExonRegion	0	2.25	3.55	11.62	4.96	19.98	8.27	7.85
41	E6d_E7a	KnownJunction	0	2.57	2.60	15.51	1.03	25.50	3.11	5.40
42	ER7a	ExonRegion	0	161.45	130.21	585.29	154.28	2034.97	186.25	440.50
43	E7_Da	KnownBoundary	1	7.91	7.46	31.64	11.08	87.62	17.07	7.31
44	E7a_E8a	KnownJunction	0	138.53	115.65	398.93	105.17	1798.88	137.64	295.03
45	ER7b	ExonRegion	0	7.27	3.18	15.25	6.75	58.94	11.51	3.92
46	E7_Db	NovelBoundary	0	2.60	5.33	19.70	4.12	70.59	14.71	4.41
47	E8_Aa	NovelBoundary	1	48.57	4.57	124.16	2.74	60.68	10.05	0.89
48	ER8a	ExonRegion	0	133.62	101.49	390.77	121.49	1609.17	140.01	271.61
49	E8a_E9a	KnownJunction	0	201.96	118.67	615.28	157.72	1859.07	164.07	403.52
50	ER9a	ExonRegion	0	181.49	129.36	506.09	158.62	2048.18	170.85	346.53
51	E9a_E10a	KnownJunction	0	143.47	109.74	371.67	143.88	1512.20	137.24	279.88
52	ER10a	ExonRegion	0	148.90	90.60	392.50	119.22	1352.75	121.36	264.20
53	E10_Da	KnownBoundary	0	150.51	79.71	412.43	104.22	1612.75	84.96	228.59
54	ER10b	ExonRegion	0	51.44	32.50	143.42	53.33	555.60	52.92	99.50
55	E10_Db	KnownBoundary	1	8.90	6.44	34.63	16.20	145.35	31.65	26.26
56	ER10c	ExonRegion	1	3.90	2.36	14.01	6.74	90.83	13.82	10.65
57	ER10d	ExonRegion	0	0.55	1.04	5.23	2.49	19.09	6.83	1.83