Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NADK	Gene	0	66.41	78.42	87.79	71.24	141.54	55.73	63.09
2	378625	Transcript	0	0.91	0.01	1.51	1.39	50.12	0.85	1.76
3	341991	Transcript	0	0.00	2.95	1.24	1.34	0.15	0.00	1.20
4	400922	Transcript	1	18.04	19.25	15.68	14.28	3.23	10.38	4.15
5	344463	Transcript	0	0	0	0	0	0	0	0
6	341426	Transcript	0	0	0	0	0	0	0	0
7	160596	Transcript	1	3.27	8.88	6.44	22.24	13.05	7.29	19.81
8	342348	Transcript	0	0.12	1.37	0.46	0.57	0.85	0.00	0.92
9	IG27_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	38.62	0.00	0.06
10	ER1a	ExonRegion	0	0.81	0.01	1.58	1.31	26.52	1.69	1.22
11	E1a_E4a	KnownJunction	0	1.00	0.00	1.45	1.46	73.72	0.00	2.31
12	ER2a	ExonRegion	0	0.00	1.75	0.84	1.00	0.31	0.00	0.81
13	E2a_E4a	KnownJunction	0	0.00	4.15	1.64	1.68	0.00	0.00	1.59
14	ER3a	ExonRegion	0	0.00	0.00	0.00	0.26	0.00	0.71	0.14
15	ER3b	ExonRegion	0	1.44	17.23	1.50	12.19	8.61	8.31	6.13
16	E3a_E4a	KnownJunction	0	8.93	52.12	6.32	44.02	10.35	21.06	18.44
17	ER4a	ExonRegion	0	45.41	118.95	69.18	86.14	116.20	55.33	66.83
18	E4a_E5a	KnownJunction	0	62.54	142.50	104.40	98.29	170.64	73.30	74.15
19	ER5a	ExonRegion	0	119.05	151.63	156.87	133.13	218.26	94.53	120.45
20	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E5a_E9a	KnownJunction	0	118.73	130.62	134.33	106.71	193.02	86.13	119.08
22	ER6a	ExonRegion	0	1.04	4.88	0.30	0.00	0.73	0.00	2.41
23	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER7a	ExonRegion	0	0.39	1.28	0.71	0.66	1.70	0.63	0.72
25	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER8a	ExonRegion	0	0.23	2.74	0.92	1.13	1.70	0.00	1.83
27	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER9a	ExonRegion	0	145.51	136.62	178.88	118.55	286.05	91.13	119.48
29	E9_Da	KnownBoundary	0	4.12	5.99	1.97	2.76	0.00	0.00	0.85
30	E9a_E10a	KnownJunction	1	26.24	28.58	23.34	22.54	4.22	15.06	6.16
31	E9a_E11b	KnownJunction	0	119.32	119.17	186.69	95.77	332.38	79.92	139.14
32	E9a_E12a	NovelJunction	0	2.15	6.02	0.57	13.57	1.15	10.61	2.38
33	ER9b	ExonRegion	0	1.01	1.46	0.38	1.92	1.69	0.00	0.12
34	E9b_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER10a	ExonRegion	0	9.84	9.91	8.02	6.01	2.23	5.69	2.13
36	E10_Da	NovelBoundary	0	29.93	23.57	34.37	20.54	16.25	9.49	11.77
37	E11_Aa	NovelBoundary	0	21.98	23.28	18.97	18.04	14.75	5.90	11.16
38	ER11a	ExonRegion	0	13.25	10.67	18.71	12.49	19.44	9.93	8.69
39	E11_Ab	KnownBoundary	0	25.92	22.67	35.01	23.38	29.09	18.97	14.22
40	ER11b	ExonRegion	0	182.91	175.17	257.00	152.97	357.78	98.30	144.07
41	E11a_E12a	KnownJunction	0	208.01	169.56	254.96	123.75	392.47	72.52	108.78
42	ER12a	ExonRegion	0	146.01	151.70	195.45	128.51	311.57	92.63	124.43
43	E12_Da	NovelBoundary	0	14.34	13.92	23.25	15.82	22.73	9.46	14.30
44	E12a_E13a	KnownJunction	0	107.62	109.42	144.65	122.18	212.45	89.97	108.36
45	E12a_E14a	KnownJunction	1	3.27	8.88	6.44	22.24	13.05	7.29	19.81
46	I12_AR1	ActiveIntronRegion	1	13.09	21.91	9.43	7.51	15.55	1.09	12.00
47	ER13a	ExonRegion	0	99.93	114.21	167.39	112.37	243.55	72.58	91.63
48	E13a_E14a	KnownJunction	0	94.48	102.22	153.16	108.66	240.90	80.88	79.50
49	ER14a	ExonRegion	0	80.20	132.91	124.07	113.65	215.54	81.54	111.14
50	E14a_E15a	KnownJunction	0	102.74	155.05	152.33	130.96	239.38	87.90	151.18
51	E15_Aa	NovelBoundary	1	40.76	2.10	53.82	0.00	0.90	0.00	2.97
52	ER15a	ExonRegion	0	81.80	139.56	112.28	111.57	214.55	71.65	117.78
53	E15_Da	NovelBoundary	1	10.75	16.42	12.07	13.55	14.50	7.53	18.46
54	E15a_E16a	KnownJunction	0	65.49	92.84	66.03	82.11	266.05	50.92	87.14
55	E15a_E17a	NovelJunction	1	2.07	10.85	19.64	15.85	28.42	9.89	24.09
56	E15a_E18a	NovelJunction	0	1.85	5.73	2.20	10.76	3.14	16.72	0.00
57	ER16a	ExonRegion	0	80.89	112.90	90.14	89.32	222.60	60.97	113.68
58	E16_Da	NovelBoundary	1	10.65	26.56	15.13	5.01	8.71	6.19	10.49
59	E16a_E17a	KnownJunction	0	58.70	100.41	84.73	89.59	149.73	66.46	100.53
60	I16	Intron	1	8.47	14.02	10.60	5.39	8.30	6.48	12.91
61	I16_AR1	ActiveIntronRegion	1	8.51	14.08	10.65	5.41	8.34	6.52	12.96
62	E17_Aa	NovelBoundary	1	10.50	21.15	15.29	8.78	3.25	1.18	13.63
63	ER17a	ExonRegion	0	73.93	157.43	109.10	124.35	214.75	79.36	110.77
64	E17a_E18a	KnownJunction	0	87.34	150.56	122.44	114.27	290.03	64.56	94.62
65	ER18a	ExonRegion	0	85.60	98.77	121.11	89.03	177.86	75.13	74.08
66	E18_Da	KnownBoundary	0	85.69	87.56	121.64	69.03	156.76	37.95	75.61
67	ER18b	ExonRegion	0	80.31	74.61	96.69	79.56	152.78	71.02	65.03
68	ER18c	ExonRegion	0	7.36	5.55	13.35	3.74	17.82	6.31	3.28