Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TFPT	Gene	0	22.46	36.86	30.02	31.10	32.15	37.77	25.81
2	391759	Transcript	0	9.36	14.31	14.08	15.24	7.12	14.95	10.17
3	339150	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	391757	Transcript	0	1.03	1.63	0.55	0.00	0.00	0.00	0.00
5	391758	Transcript	0	0.72	1.19	0.00	0.00	0.02	0.00	0.00
6	ER1a	ExonRegion	0	0.00	0.00	1.08	1.25	1.09	0.00	0.98
7	ER1b	ExonRegion	0	17.25	21.35	24.52	24.32	21.76	23.41	20.62
8	E1_Da	KnownBoundary	1	3.09	20.83	14.10	10.94	3.02	27.60	8.97
9	E1a_E1c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER1c	ExonRegion	0	28.07	40.51	39.82	44.49	18.08	43.63	28.85
11	E1_Ac	KnownBoundary	0	58.55	36.78	84.35	57.70	56.94	70.22	59.89
12	ER1d	ExonRegion	0	23.22	48.11	42.87	44.51	41.80	59.44	30.71
13	E1_Ad	KnownBoundary	0	23.98	47.60	37.55	43.26	23.81	63.57	27.49
14	ER1e	ExonRegion	0	27.14	55.38	28.15	41.36	44.74	52.45	29.30
15	E1_Db	NovelBoundary	1	7.94	3.78	26.86	14.03	11.55	9.14	13.21
16	E1b_E3a	KnownJunction	0	29.11	60.03	22.04	40.85	59.89	43.34	31.34
17	E1b_E4a	NovelJunction	0	1.39	2.89	1.95	0.00	0.00	1.18	7.94
18	I1	Intron	1	2.92	4.20	14.10	6.76	5.67	3.03	4.00
19	I1_SR1	SilentIntronRegion	1	2.93	4.23	14.18	6.79	5.71	3.04	4.02
20	E2_Aa	NovelBoundary	1	3.10	5.07	24.13	12.14	0.95	8.98	2.82
21	ER2a	ExonRegion	0	0.53	0.24	0.00	0.00	0.05	0.00	0.00
22	E2_Da	NovelBoundary	1	6.66	3.07	25.98	15.55	6.22	9.35	11.84
23	E2a_E3a	KnownJunction	0	0.92	2.13	0.00	0.00	0.00	0.00	0.00
24	E3_Aa	NovelBoundary	1	0.00	0.00	15.72	6.47	0.99	15.01	4.29
25	ER3a	ExonRegion	0	26.51	39.43	38.60	39.84	41.47	37.14	30.49
26	E3a_E4a	KnownJunction	0	26.90	35.26	34.33	23.89	54.31	38.86	34.34
27	ER4a	ExonRegion	0	24.16	37.85	30.01	21.87	33.51	45.28	30.10
28	E4a_E5a	KnownJunction	0	26.27	44.87	21.38	25.25	29.46	46.18	25.94
29	I4_AR3	ActiveIntronRegion	0	6.08	2.15	4.44	0.00	11.85	3.22	1.49
30	E5_Aa	NovelBoundary	0	5.44	5.75	3.59	4.61	5.46	5.84	8.21
31	ER5a	ExonRegion	0	24.48	47.47	20.83	30.98	24.98	45.47	32.09
32	E5a_E6a	KnownJunction	0	23.53	46.05	21.02	27.80	21.65	55.77	41.25
33	E5a_E6b	KnownJunction	0	1.03	1.63	0.55	0.00	0.00	0.00	0.00
34	ER6a	ExonRegion	0	27.20	47.80	33.35	31.14	28.71	60.14	40.94
35	E6_Ab	KnownBoundary	0	37.87	54.83	47.77	25.68	44.52	64.48	47.04
36	ER6b	ExonRegion	0	28.44	39.41	33.07	30.60	44.31	40.61	28.58
37	E6a_E7a	KnownJunction	1	15.54	40.56	7.95	13.03	6.75	37.39	17.68
38	E7_Aa	NovelBoundary	0	11.13	1.44	12.86	0.00	13.51	1.10	9.23
39	ER7a	ExonRegion	0	13.76	34.98	16.01	17.47	27.39	27.01	14.26
40	ER7b	ExonRegion	0	0.77	3.64	2.48	2.08	4.05	2.45	3.82
41	ER7c	ExonRegion	0	0.00	2.43	1.35	0.00	2.20	1.23	0.67