Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AKT1S1	Gene	0	84.32	54.21	69.85	41.37	48.62	82.60	99.26
2	391830	Transcript	1	7.19	4.21	3.36	9.51	0.99	42.38	0.84
3	391835	Transcript	1	25.33	25.00	11.87	18.40	2.83	27.60	1.50
4	344175	Transcript	0	1.60	0.00	3.87	0.00	5.28	1.15	7.57
5	391834	Transcript	0	0	0	0	0	0	0	0
6	391832	Transcript	1	1.32	4.70	3.72	2.55	10.56	13.72	13.50
7	391831	Transcript	1	23.72	13.62	11.59	8.92	3.44	8.79	7.72
8	391833	Transcript	1	21.72	9.38	9.66	8.10	4.50	5.73	5.13
9	ER1a	ExonRegion	1	8.07	3.21	3.29	6.77	1.98	26.85	0.80
10	E1_Da	NovelBoundary	0	274.88	81.49	196.49	75.96	245.90	131.51	148.85
11	E1a_E4b	KnownJunction	1	6.31	5.20	3.43	12.25	0.00	57.91	0.89
12	ER2a	ExonRegion	1	25.33	25.00	11.87	18.40	2.83	27.60	1.50
13	E2_Ab	KnownBoundary	1	41.61	35.70	25.94	30.53	7.70	28.73	8.74
14	E2_Ac	KnownBoundary	1	52.84	31.37	28.63	14.76	64.71	29.13	12.67
15	ER2b	ExonRegion	1	99.29	63.62	53.44	46.53	47.23	63.04	40.44
16	ER2c	ExonRegion	1	128.13	68.70	70.75	45.72	88.99	71.84	54.13
17	E2_Ad	KnownBoundary	0	109.54	55.93	55.58	41.80	75.75	59.07	52.95
18	ER2d	ExonRegion	1	113.55	64.82	69.24	44.30	47.88	73.24	37.71
19	E2_Da	KnownBoundary	1	87.51	50.44	54.06	37.98	37.65	62.90	16.67
20	E2a_E4b	KnownJunction	0	1.60	0.00	3.87	0.00	5.28	1.15	7.57
21	ER2e	ExonRegion	1	89.56	62.10	64.33	45.11	56.33	83.95	40.67
22	E2_Db	KnownBoundary	1	88.21	47.92	65.80	52.37	54.70	75.28	33.98
23	E2b_E4b	KnownJunction	1	1.32	4.70	3.72	2.55	10.56	13.72	13.50
24	ER2f	ExonRegion	1	92.65	49.33	73.19	31.51	50.04	63.50	32.97
25	E2c_E4b	KnownJunction	0	38.40	28.87	34.26	27.15	16.14	37.17	76.50
26	I2_AR1	ActiveIntronRegion	0	14.51	11.49	7.16	8.28	2.54	7.04	3.97
27	E3_Aa	NovelBoundary	1	38.92	17.16	22.94	10.84	2.10	11.74	6.49
28	ER3a	ExonRegion	1	45.82	27.24	22.58	16.15	6.89	17.57	10.79
29	E3_Da	NovelBoundary	1	52.44	23.15	45.54	19.94	6.78	40.74	10.93
30	E3a_E4b	KnownJunction	0	1.62	0.00	0.60	1.68	0.00	0.00	4.64
31	I3	Intron	0	37.17	13.33	18.53	12.07	7.34	8.73	8.61
32	I3_SR1	SilentIntronRegion	0	37.29	13.36	18.58	12.11	7.37	8.76	8.64
33	E4_Aa	NovelBoundary	1	93.13	32.84	35.83	24.30	9.96	20.23	13.76
34	ER4a	ExonRegion	1	43.44	18.77	19.32	16.19	9.00	11.46	10.26
35	E4_Ab	KnownBoundary	1	24.73	14.13	5.32	5.96	1.87	14.28	4.80
36	ER4b	ExonRegion	0	65.54	86.85	56.51	56.12	51.85	128.84	149.59
37	E4_Da	KnownBoundary	1	79.04	127.31	80.96	65.51	48.41	189.29	214.99
38	ER4c	ExonRegion	1	79.48	125.22	80.38	64.25	50.12	169.90	227.69
39	E4b_E5a	KnownJunction	1	100.02	111.44	96.44	74.37	67.80	168.38	274.73
40	I4_SR2	SilentIntronRegion	1	26.18	6.43	7.71	7.05	1.69	10.25	2.50
41	ER5a	ExonRegion	1	93.62	114.41	105.76	65.51	80.88	149.60	278.11
42	E5a_E6a	KnownJunction	1	111.82	128.15	126.88	73.15	101.23	155.41	317.70
43	ER6a	ExonRegion	0	98.76	84.37	98.94	57.47	87.58	134.46	242.60
44	E6a_E7a	KnownJunction	0	132.65	90.93	135.25	73.47	88.15	176.61	316.84
45	I6	Intron	0	17.74	9.90	9.88	11.84	3.75	9.12	6.79
46	I6_AR1	ActiveIntronRegion	0	30.41	14.32	14.81	17.43	4.78	8.35	10.87
47	I6_SR1	SilentIntronRegion	0	42.17	16.74	20.90	19.46	5.50	14.57	12.76
48	I6_AR2	ActiveIntronRegion	0	13.12	10.02	8.98	9.15	2.99	9.76	5.87
49	I6_SR2	SilentIntronRegion	0	11.28	6.88	6.43	10.16	3.54	7.72	4.78
50	ER7a	ExonRegion	0	236.39	143.39	241.29	118.05	172.37	274.99	385.67
51	ER7b	ExonRegion	0	3.07	2.43	0.00	3.12	2.43	3.06	5.40
52	ER7c	ExonRegion	0	1.69	1.46	0.00	2.00	1.30	0.98	1.75
53	ER7d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	IG32_AR2	ActiveIntergenicRegion	0	3.35	4.55	2.33	3.02	0.00	9.39	0.00