Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ZNF528 Gene 0 9.08 5.87 7.28 2.51 15.36 2.40 18.03 2 360465 Transcript 0 0 0 0 0 0 0 0 3 391788 Transcript 0 0 0 0 0 0 0 0 4 332323 Transcript 0 0.05 0.00 0.07 0.03 0.14 0.08 0.03 5 391787 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 301085 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 IG21 Intergenic 0 2.85 3.60 3.69 2.80 9.87 2.92 3.65 8 IG21_AR1 ActiveIntergenicRegion 0 6.67 16.29 8.15 10.83 26.56 10.29 10.77 9 IG21_AR2 ActiveIntergenicRegion 0 8.90 8.37 9.40 5.05 21.37 5.83 8.18 10 IG21_AR4 ActiveIntergenicRegion 0 2.16 2.28 2.40 2.54 8.38 2.26 3.25 11 IG21_SR5 SilentIntergenicRegion 0 3.64 3.03 5.93 1.13 17.31 1.39 2.29 12 ER1a ExonRegion 0 6.60 3.35 2.40 0.61 8.32 0.53 15.81 13 E1a_E2a KnownJunction 0 11.82 6.44 11.25 0.00 21.81 1.26 35.11 14 ER2a ExonRegion 0 10.22 10.61 9.78 4.37 12.75 1.73 26.29 15 E2a_E3a KnownJunction 0 7.94 9.56 7.03 4.20 29.90 6.24 25.12 16 ER3a ExonRegion 0 13.25 15.62 9.30 5.46 17.75 4.21 30.10 17 E3a_E4a KnownJunction 0 15.56 18.73 13.34 6.39 13.67 5.41 29.21 18 ER4a ExonRegion 0 9.18 9.69 13.26 6.05 18.29 5.71 38.38 19 E4a_E5a KnownJunction 0 9.33 8.35 9.89 6.23 26.42 1.05 37.02 20 ER5a ExonRegion 0 14.76 13.18 13.08 4.20 22.69 6.56 44.13 21 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER6a ExonRegion 0 12.33 13.50 14.03 1.72 26.35 8.03 42.95 23 E6_Da NovelBoundary 0 4.92 1.23 0.75 0.00 2.35 3.27 10.52 24 E6a_E7a KnownJunction 0 9.75 8.01 18.01 3.20 29.42 16.51 21.88 25 I6_SR3 SilentIntronRegion 0 1.51 2.31 4.03 0.70 4.43 0.43 7.52 26 I6_AR4 ActiveIntronRegion 0 5.11 4.10 4.91 2.04 9.73 0.50 9.10 27 E7_Aa NovelBoundary 0 8.03 4.39 6.57 0.00 5.39 0.00 13.31 28 ER7a ExonRegion 0 14.54 6.86 11.67 2.01 21.21 2.82 30.36 29 ER7b ExonRegion 0 13.97 10.93 10.96 2.49 20.61 0.00 33.48 30 ER7c ExonRegion 0 17.44 11.46 13.19 5.81 29.19 4.53 30.09 31 ER8a ExonRegion 0 0.00 1.17 0.00 0.00 0.39 0.00 0.00 32 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 1.04 0.00 0.00 33 ER9a ExonRegion 0 0.28 0.03 0.27 0.00 0.74 0.00 0.00 34 E9_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E9a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER9b ExonRegion 0 0.00 0.00 0.00 0.00 0.02 0.00 0.00 38 E9b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER10a ExonRegion 0 0.61 1.36 0.54 0.00 43.22 0.72 0.00 40 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER11a ExonRegion 0 0.20 0.01 0.28 0.11 0.54 0.33 0.12 43 ER12a ExonRegion 0 0.05 0.00 0.00 0.00 0.16 0.00 0.00