Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SHANK1	Gene	0	0.02	0.11	0.34	3.90	3.28	2.83	0.22
2	391814	Transcript	0	0.00	0.00	0.07	0.98	2.55	0.69	0.00
3	293441	Transcript	0	0	0	0	0	0	0	0
4	359082	Transcript	0	0.00	0.00	0.59	1.00	6.99	0.00	0.80
5	391813	Transcript	0	0.00	0.00	0.01	0.01	0.04	0.00	0.01
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.34	0.05	0.00
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	1.15	0.00	0.00
8	ER2a	ExonRegion	0	0.00	0.00	0.43	0.00	0.81	1.23	0.00
9	ER2b	ExonRegion	0	0.00	0.34	0.67	5.81	2.83	4.02	0.19
10	E2a_E3a	KnownJunction	0	0.00	0.00	0.70	14.66	7.79	5.79	0.00
11	ER3a	ExonRegion	0	0.00	1.10	1.42	10.53	4.62	1.29	0.23
12	E3a_E4a	KnownJunction	0	0.00	1.63	2.17	13.63	4.03	0.00	0.00
13	ER4a	ExonRegion	0	0.67	1.11	1.86	7.31	4.96	1.26	0.06
14	E4a_E5a	KnownJunction	0	0.73	1.50	0.00	2.68	6.25	4.31	0.00
15	ER5a	ExonRegion	0	0.18	0.89	2.50	5.88	6.34	4.86	0.48
16	E5a_E6a	KnownJunction	0	0.73	1.60	2.76	2.22	3.76	2.81	1.33
17	ER6a	ExonRegion	0	0.32	0.37	0.88	5.52	4.89	4.04	1.41
18	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	5.66	6.02	4.48	1.32
19	ER7a	ExonRegion	0	0.00	0.00	0.00	8.50	5.83	3.04	1.14
20	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	8.59	1.06	2.87	1.72
21	ER8a	ExonRegion	0	0.00	0.00	0.14	5.24	6.86	4.84	0.46
22	E8a_E9a	KnownJunction	0	0.00	0.00	0.80	1.06	2.31	8.12	0.00
23	ER9a	ExonRegion	0	0.00	0.00	0.44	7.02	5.42	5.23	0.14
24	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	4.61	5.09	3.99	0.67
25	ER10a	ExonRegion	0	0.00	0.00	0.00	4.09	4.81	5.54	0.60
26	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	4.90	3.07	4.18	0.00
27	ER11a	ExonRegion	0	0.00	0.00	0.16	2.27	0.95	0.23	0.15
28	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	4.31	0.00	0.00	0.00
29	ER12a	ExonRegion	0	0.00	0.00	0.42	3.94	4.04	2.53	0.55
30	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	10.76	5.33	3.97	0.00
31	ER13a	ExonRegion	0	0.00	0.00	0.07	6.46	6.52	3.37	1.20
32	E13a_E14a	KnownJunction	0	0.00	0.00	0.60	6.61	4.10	5.12	0.67
33	ER14a	ExonRegion	0	0.00	0.00	0.94	6.22	9.15	3.19	0.40
34	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E14a_E16b	KnownJunction	0	0.00	0.00	0.59	1.00	6.99	0.00	0.80
36	E15a_E16b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.06	0.00	0.00
38	ER16a	ExonRegion	0	0.00	0.00	0.01	0.01	0.04	0.00	0.01
39	E16_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER16b	ExonRegion	0	0.00	0.00	0.07	4.43	7.63	0.06	0.41
41	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	2.74	6.41	0.00	0.00
42	ER17a	ExonRegion	0	0.00	0.00	0.53	6.04	4.47	1.36	0.00
43	E17a_E18a	KnownJunction	0	0.00	0.00	2.49	10.05	2.33	1.21	0.00
44	ER18a	ExonRegion	0	0.00	0.00	1.05	10.16	5.88	2.37	0.00
45	E18a_E19a	KnownJunction	0	0.00	0.00	0.69	6.77	7.70	2.71	0.00
46	ER19a	ExonRegion	0	0.00	0.00	1.32	12.01	10.03	1.97	0.00
47	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	1.68	5.51	0.00	0.00
48	E19a_E21a	KnownJunction	0	0.00	0.00	1.78	16.55	2.81	1.13	0.00
49	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	1.68	2.33	1.66	0.00
50	ER20a	ExonRegion	0	0.00	0.00	0.00	2.49	5.16	1.23	0.00
51	ER21a	ExonRegion	0	0.00	0.00	0.96	10.52	10.79	6.17	0.00
52	E21a_E22a	KnownJunction	0	0.00	0.00	0.70	3.79	15.08	11.60	0.00
53	ER22a	ExonRegion	0	0.00	0.00	1.00	4.70	9.95	10.50	0.20
54	E22a_E23a	KnownJunction	0	0.00	0.00	1.62	4.09	15.24	15.52	0.89
55	ER23a	ExonRegion	0	0.00	0.25	0.42	5.23	8.37	11.29	0.28
56	E23a_E24a	KnownJunction	0	0.00	1.34	0.00	4.52	8.69	5.20	0.00
57	ER24a	ExonRegion	0	0.00	0.05	0.02	2.14	1.68	2.00	0.11
58	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	3.98	3.55	1.23	0.89
59	ER25a	ExonRegion	0	0.00	0.00	0.54	4.17	3.33	4.84	0.16
60	E25_Da	KnownBoundary	0	0.00	0.00	0.70	4.52	3.41	4.82	0.00
61	ER25b	ExonRegion	0	0.00	0.00	0.11	3.23	4.70	4.40	0.03