Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LMTK3	Gene	0	5.29	15.18	1.65	2.05	6.28	1.81	5.14
2	270238	Transcript	0	4.09	11.81	1.57	1.72	8.30	1.37	4.88
3	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.79	0.00	0.00
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER2a	ExonRegion	0	0.00	0.00	0.00	0.41	0.84	0.00	0.00
6	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	1.68	2.19	0.00	0.00
7	ER3a	ExonRegion	0	0.87	1.38	0.38	0.46	4.70	0.00	0.00
8	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	1.11	14.59	0.00	0.00
9	ER4a	ExonRegion	0	1.15	1.22	0.65	0.70	4.85	0.58	0.00
10	E4a_E5a	KnownJunction	0	0.00	0.00	0.73	1.35	5.00	0.00	0.00
11	ER5a	ExonRegion	0	0.02	1.17	0.51	0.92	3.60	0.00	0.00
12	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER6a	ExonRegion	0	1.94	0.02	0.82	0.80	10.02	0.00	0.42
14	E6a_E7a	KnownJunction	0	0.00	0.00	1.64	0.00	9.57	0.00	0.00
15	ER7a	ExonRegion	0	1.27	1.05	2.65	0.00	10.45	0.00	0.55
16	E7a_E8a	KnownJunction	0	0.00	0.00	3.72	0.00	12.10	0.00	0.00
17	ER8a	ExonRegion	0	0.04	0.05	1.52	0.64	11.60	0.00	0.05
18	E8a_E9a	KnownJunction	0	0.00	0.00	0.70	0.00	9.98	0.00	0.00
19	E9_Aa	NovelBoundary	0	14.50	12.79	1.64	1.68	2.33	1.37	8.89
20	ER9a	ExonRegion	0	7.93	16.58	3.75	1.20	21.35	0.17	8.69
21	E9a_E10a	KnownJunction	0	9.23	21.28	4.33	3.09	23.21	1.15	12.54
22	ER10a	ExonRegion	0	14.20	17.92	4.08	3.97	15.87	1.61	18.61
23	E10a_E11a	KnownJunction	0	18.29	11.35	5.56	1.19	27.64	3.14	30.61
24	ER11a	ExonRegion	0	14.25	20.28	5.03	1.43	15.23	2.23	18.94
25	E11a_E12a	KnownJunction	0	10.41	11.61	0.73	1.68	11.00	1.05	9.97
26	ER12a	ExonRegion	0	6.43	10.25	1.74	1.96	6.13	1.17	5.95
27	E12a_E13a	KnownJunction	0	2.45	9.20	0.65	5.50	3.25	6.43	2.95
28	I12	Intron	0	9.91	4.47	3.19	2.15	12.32	1.17	3.09
29	I12_SR1	SilentIntronRegion	0	11.78	5.49	3.78	2.78	13.32	1.22	3.67
30	I12_AR3	ActiveIntronRegion	0	0.65	0.00	0.00	0.00	7.53	0.00	0.00
31	I12_SR2	SilentIntronRegion	0	4.43	1.30	1.55	0.00	9.37	1.33	1.46
32	ER13a	ExonRegion	0	1.18	6.46	0.43	1.63	2.10	1.23	1.55
33	E13a_E14a	KnownJunction	0	5.69	9.62	1.34	8.02	3.02	1.02	4.77
34	I13	Intron	0	5.72	9.17	1.72	3.95	5.02	2.04	1.96
35	I13_SR1	SilentIntronRegion	0	5.73	9.19	1.72	3.95	5.03	2.04	1.96
36	E14_Aa	NovelBoundary	0	6.54	3.02	1.34	0.00	7.86	1.66	2.16
37	ER14a	ExonRegion	0	7.59	13.18	1.51	2.84	5.80	2.60	5.53
38	E14a_E15a	KnownJunction	0	8.53	12.03	1.95	1.52	9.52	0.00	9.70
39	E15_Aa	NovelBoundary	0	0.65	14.63	0.00	1.16	0.00	2.71	1.45
40	ER15a	ExonRegion	0	7.36	57.42	1.15	1.74	7.05	6.47	4.82
41	E15a_E16a	KnownJunction	0	3.35	86.33	1.21	4.17	3.07	6.67	10.85
42	I15	Intron	0	7.49	8.66	2.07	4.80	1.20	2.86	1.13
43	I15_SR1	SilentIntronRegion	0	7.50	8.67	2.07	4.81	1.20	2.86	1.13
44	ER16a	ExonRegion	0	4.56	57.81	1.84	5.18	2.81	7.08	4.89
45	IG7	Intergenic	0	58.94	42.06	22.54	27.09	38.81	16.05	27.34
46	IG7_AR5	ActiveIntergenicRegion	0	17.33	9.79	4.19	4.87	1.73	3.47	3.07
47	IG7_AR4	ActiveIntergenicRegion	0	12.13	11.38	4.28	5.75	0.88	2.00	2.17
48	IG7_AR1	ActiveIntergenicRegion	0	94.44	66.63	36.90	44.20	66.64	26.34	45.90