Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	IRF3	Gene	0	98.05	101.88	84.63	96.47	178.88	76.31	98.00
2	309877	Transcript	0	97.64	109.68	108.52	101.51	252.98	60.76	130.75
3	377135	Transcript	0	18.91	18.53	22.84	17.58	24.47	10.59	19.29
4	377139	Transcript	0	0.00	0.00	0.89	2.95	2.05	0.00	0.89
5	ER1a	ExonRegion	0	13.96	5.67	9.83	15.77	40.78	11.83	24.48
6	E1_Da	NovelBoundary	1	200.01	54.83	39.19	21.97	51.82	41.75	17.41
7	E1a_E2a	KnownJunction	0	0.00	0.00	1.03	1.06	0.00	0.00	0.00
8	I1	Intron	1	171.45	33.43	51.35	27.46	61.77	24.54	16.30
9	I1_AR1	ActiveIntronRegion	1	172.60	33.66	51.69	27.64	62.21	24.69	16.41
10	E2_Aa	NovelBoundary	1	174.13	46.08	53.89	35.98	75.24	40.25	23.09
11	ER2a	ExonRegion	0	97.86	96.98	60.09	80.08	239.51	71.04	102.22
12	E2a_E3a	KnownJunction	0	75.96	142.52	69.22	75.99	210.98	71.02	91.61
13	I2	Intron	1	28.04	10.17	9.83	6.46	5.67	8.43	5.93
14	I2_AR1	ActiveIntronRegion	1	26.54	11.50	8.70	6.42	4.41	8.96	4.92
15	I2_AR3	ActiveIntronRegion	0	32.62	6.45	13.17	6.66	9.34	7.01	8.85
16	E3_Aa	NovelBoundary	1	58.70	22.38	45.40	7.96	7.63	17.39	6.54
17	ER3a	ExonRegion	0	185.93	181.66	176.03	157.28	331.85	118.48	175.59
18	E3_Da	NovelBoundary	1	29.19	16.66	19.23	5.07	17.45	8.74	8.67
19	E3a_E4a	KnownJunction	0	156.18	167.17	191.50	156.40	291.76	140.08	168.61
20	E4_Aa	NovelBoundary	1	37.10	13.29	11.60	12.98	10.63	22.62	11.26
21	ER4a	ExonRegion	0	166.14	175.20	164.02	155.64	247.85	130.20	157.43
22	E4a_E5a	KnownJunction	0	182.20	152.95	172.75	151.79	270.16	122.39	145.42
23	E5_Aa	NovelBoundary	1	81.01	5.86	78.95	4.96	3.30	1.45	4.82
24	ER5a	ExonRegion	0	151.82	123.25	135.09	121.76	243.82	109.44	122.37
25	E5a_E6a	KnownJunction	0	115.14	84.62	97.42	63.66	144.93	63.14	78.84
26	E5a_E7b	KnownJunction	0	0.00	0.00	0.89	2.95	2.05	0.00	0.89
27	E6_Aa	NovelBoundary	0	9.88	19.76	9.10	7.64	4.17	21.15	4.33
28	ER6a	ExonRegion	0	102.19	114.16	86.58	118.92	184.01	88.39	110.04
29	E6_Da	NovelBoundary	1	33.88	17.16	15.55	11.03	7.65	14.23	8.25
30	E6a_E7a	KnownJunction	0	14.35	14.19	19.11	13.30	12.89	9.35	11.41
31	E6a_E7b	KnownJunction	0	97.64	109.68	108.52	101.51	252.98	60.76	130.75
32	E6a_E8a	NovelJunction	1	16.91	7.99	4.93	26.77	0.00	21.28	1.35
33	I6_AR1	ActiveIntronRegion	1	23.92	9.09	6.55	2.01	19.31	7.32	7.02
34	I6_SR1	SilentIntronRegion	0	19.93	7.35	6.96	5.82	24.20	3.06	7.89
35	E7_Ab	NovelBoundary	0	27.37	19.26	22.23	20.91	19.59	9.33	19.89
36	ER7a	ExonRegion	0	23.46	22.87	26.58	21.86	36.06	11.83	27.18
37	ER7b	ExonRegion	0	102.71	153.25	97.68	132.08	231.98	87.38	143.55
38	E7_Da	NovelBoundary	1	27.82	14.87	17.22	4.58	4.45	14.69	3.58
39	E7a_E8a	KnownJunction	0	116.11	145.96	125.38	138.52	248.23	99.29	121.30
40	E8_Aa	NovelBoundary	1	29.39	22.93	8.58	15.63	11.13	17.85	6.49
41	ER8a	ExonRegion	0	99.21	119.24	84.09	104.50	147.44	86.93	82.23