Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	BBC3	Gene	0	133.27	606.72	27.76	45.46	25.47	85.46	0.71
2	341983	Transcript	0	72.57	170.13	9.14	7.26	7.72	20.42	2.19
3	300880	Transcript	0	50.40	161.46	4.44	7.12	0.95	20.26	0.77
4	359924	Transcript	0	18.54	129.78	3.02	10.59	2.75	17.46	0.00
5	IG21_AR2	ActiveIntergenicRegion	0	3.49	12.98	11.21	15.97	5.21	17.02	0.00
6	IG21_AR1	ActiveIntergenicRegion	0	164.56	275.57	25.03	13.10	12.00	35.27	2.18
7	ER1a	ExonRegion	0	69.07	314.40	9.71	10.54	2.01	30.73	2.48
8	E1_Da	NovelBoundary	0	43.46	19.05	7.53	1.00	1.18	3.54	0.00
9	E1a_E3a	NovelJunction	1	87.51	552.93	10.81	11.16	11.53	58.50	0.00
10	E1a_E4a	KnownJunction	0	72.57	170.13	9.14	7.26	7.72	20.42	2.19
11	E1a_E5a	KnownJunction	0	50.40	161.46	4.44	7.12	0.95	20.26	0.77
12	I1	Intron	0	39.15	30.90	9.16	2.32	2.50	4.35	0.66
13	I1_SR1	SilentIntronRegion	0	47.75	18.67	8.80	1.36	3.25	4.71	1.11
14	I1_AR1	ActiveIntronRegion	0	47.12	41.45	11.88	2.98	3.33	5.02	0.44
15	I1_SR2	SilentIntronRegion	0	27.47	24.74	6.45	2.03	1.32	3.53	0.72
16	ER2a	ExonRegion	1	2.80	62.01	0.19	12.71	0.16	12.60	0.00
17	E2a_E3a	KnownJunction	0	1.57	47.45	0.00	5.53	0.00	9.30	0.00
18	E2a_E4a	NovelJunction	1	16.64	26.56	7.76	9.21	2.26	14.28	0.75
19	E2a_E5a	NovelJunction	1	27.19	60.27	4.07	12.08	1.18	21.49	0.00
20	I2	Intron	0	35.72	19.55	12.71	5.43	2.30	5.76	0.20
21	I2_AR1	ActiveIntronRegion	1	29.75	16.34	10.65	6.01	4.28	5.28	0.28
22	I2_SR2	SilentIntronRegion	1	59.16	38.71	23.46	10.72	2.93	9.38	0.33
23	E3_Aa	NovelBoundary	0	12.65	17.37	5.16	13.06	1.18	5.23	0.00
24	ER3a	ExonRegion	0	44.85	216.45	5.03	11.74	3.63	28.63	0.00
25	E3a_E4a	KnownJunction	0	24.92	193.20	6.88	12.41	7.19	19.30	0.00
26	I3	Intron	0	21.35	22.59	16.84	8.30	1.68	5.51	0.17
27	I3_SR1	SilentIntronRegion	0	21.40	21.65	14.54	6.94	1.30	3.55	0.06
28	I3_AR1	ActiveIntronRegion	0	21.29	25.73	24.36	12.76	2.93	11.86	0.55
29	E4_Aa	NovelBoundary	0	28.12	30.79	30.59	20.72	4.40	15.22	0.80
30	ER4a	ExonRegion	0	94.86	534.42	30.02	48.23	21.86	77.11	1.58
31	E4a_E5a	KnownJunction	0	156.10	905.05	54.51	60.44	55.95	118.48	3.84
32	I4	Intron	0	39.35	27.51	9.97	3.73	0.80	2.66	0.19
33	I4_SR1	SilentIntronRegion	0	47.09	23.15	11.11	3.14	0.94	2.79	0.20
34	E5_Aa	NovelBoundary	0	37.70	44.82	5.76	9.48	2.26	6.86	0.00
35	ER5a	ExonRegion	0	200.34	878.89	41.55	64.69	39.94	124.12	0.78
36	IG20_AR1	ActiveIntergenicRegion	0	9.72	6.64	9.82	11.72	56.12	10.44	7.19