Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CCDC9 Gene 0 37.25 99.34 40.81 79.32 29.29 119.00 18.92 2 221922 Transcript 0 45.14 113.52 49.09 90.44 36.13 136.85 23.94 3 IG21_AR1 ActiveIntergenicRegion 0 164.56 275.57 25.03 13.10 12.00 35.27 2.18 4 IG21_AR2 ActiveIntergenicRegion 0 3.49 12.98 11.21 15.97 5.21 17.02 0.00 5 ER1a ExonRegion 0 25.32 47.96 24.00 51.46 12.31 60.14 7.59 6 E1a_E2a KnownJunction 0 54.63 114.54 46.46 108.74 18.47 125.61 19.52 7 I1_AR1 ActiveIntronRegion 0 8.51 8.79 6.84 6.67 8.80 10.64 1.65 8 E2_Aa NovelBoundary 1 18.58 4.44 12.98 0.00 0.00 4.07 2.19 9 ER2a ExonRegion 0 29.26 90.82 28.35 76.10 16.62 80.19 7.77 10 E2a_E3a KnownJunction 0 15.61 82.20 15.09 49.74 19.09 70.13 8.61 11 ER3a ExonRegion 0 49.88 134.39 52.01 101.25 39.08 147.91 20.96 12 E3a_E4a KnownJunction 0 77.39 119.69 87.56 110.53 44.75 158.20 31.06 13 ER4a ExonRegion 0 37.82 116.55 54.83 81.79 49.24 140.68 22.39 14 E4a_E5a KnownJunction 0 22.16 87.25 42.87 83.33 22.82 126.55 15.98 15 ER5a ExonRegion 0 30.66 96.02 41.70 78.73 23.90 114.04 17.21 16 E5a_E6a KnownJunction 0 47.37 144.83 44.09 108.20 20.17 176.64 27.83 17 ER6a ExonRegion 0 41.25 133.46 53.49 108.10 20.54 161.55 22.54 18 E6a_E7a KnownJunction 0 38.42 121.74 53.52 98.77 24.76 151.82 21.38 19 ER7a ExonRegion 0 24.97 75.38 28.38 64.10 25.22 110.67 11.36 20 E7a_E8a KnownJunction 0 32.14 79.29 33.30 61.61 14.66 123.98 20.29 21 E8_Aa NovelBoundary 1 17.02 7.57 6.22 0.00 1.91 5.20 1.46 22 ER8a ExonRegion 0 35.17 113.20 37.71 81.09 27.55 124.30 24.01 23 E8a_E9a KnownJunction 0 46.97 111.50 55.28 86.53 60.44 126.63 33.35 24 ER9a ExonRegion 0 65.89 123.22 70.87 101.06 64.58 152.52 40.96 25 E9a_E10a KnownJunction 0 72.95 117.33 76.71 81.68 66.81 141.26 32.86 26 ER10a ExonRegion 0 62.88 135.47 58.28 101.20 45.94 169.03 34.00 27 E10a_E11a KnownJunction 0 49.10 150.77 58.89 115.84 77.80 181.92 43.08 28 ER11a ExonRegion 0 73.43 160.61 81.18 132.81 64.29 210.64 41.79 29 E11a_E12a KnownJunction 0 74.70 175.73 54.10 132.56 50.55 200.44 32.98 30 ER12a ExonRegion 0 30.29 78.89 30.40 64.80 21.38 92.60 13.20 31 IG22_AR1 ActiveIntergenicRegion 0 8.57 12.47 3.58 11.07 2.85 22.75 2.92 32 IG22_SR2 SilentIntergenicRegion 0 6.82 17.72 4.39 7.08 0.00 18.43 1.08 33 IG22_AR2 ActiveIntergenicRegion 0 9.01 35.47 10.04 26.86 4.27 58.34 9.32 34 IG22_SR3 SilentIntergenicRegion 0 8.65 5.97 7.17 7.00 3.71 2.96 7.61 35 IG22_AR5 ActiveIntergenicRegion 0 6.30 4.04 6.63 3.47 2.71 5.07 8.13