Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PRKD2	Gene	0	76.58	193.64	63.09	172.83	103.07	83.01	88.72
2	291281	Transcript	0	101.90	246.44	87.00	234.87	134.65	104.69	122.82
3	ER1a	ExonRegion	0	30.99	81.63	21.04	40.08	23.27	35.92	19.61
4	E1a_E2a	KnownJunction	0	42.09	172.87	28.68	103.00	34.51	61.83	43.08
5	E1a_E3a	NovelJunction	1	0.93	2.97	4.27	21.75	1.13	19.27	0.89
6	E2_Aa	NovelBoundary	1	17.61	29.08	15.25	94.74	1.18	19.27	22.13
7	ER2a	ExonRegion	0	54.25	185.65	45.55	151.67	55.04	85.69	62.95
8	E2a_E3a	KnownJunction	0	71.40	202.16	62.81	206.68	64.64	94.44	93.68
9	ER3a	ExonRegion	0	93.57	213.05	73.09	209.41	105.69	100.90	102.20
10	E3a_E4a	KnownJunction	0	133.05	263.69	106.20	245.88	102.56	131.32	159.38
11	E3a_E5a	NovelJunction	0	1.03	0.00	0.89	8.37	0.00	5.98	0.89
12	ER4a	ExonRegion	0	68.19	215.41	61.69	213.62	90.93	96.10	115.69
13	E4a_E5a	KnownJunction	0	81.41	245.53	71.18	237.67	106.73	114.57	163.01
14	ER5a	ExonRegion	0	97.07	235.27	77.76	246.28	120.58	88.28	130.09
15	E5a_E6a	KnownJunction	0	150.61	277.01	90.25	288.14	180.27	99.51	152.84
16	E5a_E8a	NovelJunction	1	0.00	0.00	0.89	7.31	0.00	11.90	0.57
17	ER6a	ExonRegion	0	106.69	240.70	89.48	231.63	136.71	89.80	125.61
18	E6a_E7a	KnownJunction	0	77.07	194.57	92.88	201.80	95.46	93.40	110.07
19	ER7a	ExonRegion	0	96.87	218.30	91.76	234.24	138.41	94.81	128.67
20	E7a_E8a	KnownJunction	0	98.30	255.17	105.42	246.45	134.65	109.34	182.75
21	ER8a	ExonRegion	0	104.22	288.58	102.57	273.38	142.09	110.10	166.99
22	E8a_E9a	KnownJunction	0	128.05	357.50	93.64	353.76	131.12	129.93	218.48
23	ER9a	ExonRegion	0	110.29	350.22	103.20	308.13	197.09	119.90	173.30
24	E9a_E10a	KnownJunction	0	91.94	265.24	89.00	254.22	131.72	99.32	97.38
25	ER10a	ExonRegion	0	82.08	200.15	69.00	182.32	116.83	69.65	96.92
26	E10a_E11a	KnownJunction	0	62.39	147.59	69.41	169.40	124.99	71.23	76.42
27	ER11a	ExonRegion	0	97.55	211.32	91.34	207.16	136.93	86.91	102.40
28	E11a_E12a	KnownJunction	0	128.80	259.75	106.94	239.92	149.87	86.35	108.99
29	E11a_E13a	NovelJunction	0	0.00	2.65	0.00	6.18	0.00	9.57	0.00
30	ER12a	ExonRegion	0	162.76	302.68	136.25	296.47	158.44	102.30	123.79
31	E12a_E13a	KnownJunction	0	159.97	308.06	126.30	310.76	164.14	109.64	107.10
32	ER13a	ExonRegion	0	123.69	296.40	120.18	282.79	153.95	129.30	130.70
33	E13a_E14a	KnownJunction	0	142.05	270.83	141.02	272.16	199.45	148.15	137.54
34	E14_Aa	NovelBoundary	1	62.62	0.00	49.81	0.00	0.00	0.00	2.59
35	ER14a	ExonRegion	0	130.12	263.34	111.92	248.31	201.52	114.98	125.96
36	E14a_E15a	KnownJunction	0	92.03	274.54	88.13	257.09	158.83	139.06	137.80
37	ER15a	ExonRegion	0	141.49	307.90	118.56	293.29	250.26	134.54	176.91
38	E15a_E16a	KnownJunction	0	172.82	286.23	126.90	308.70	232.30	159.62	202.89
39	ER16a	ExonRegion	0	115.19	294.94	89.13	265.61	202.49	135.88	153.86
40	E16a_E17a	KnownJunction	0	85.44	273.20	71.09	229.84	136.17	99.59	121.49
41	ER17a	ExonRegion	0	85.46	258.47	66.95	226.54	139.11	110.80	98.10
42	E17a_E18a	KnownJunction	0	91.88	238.36	65.07	228.81	119.58	121.67	88.32
43	ER18a	ExonRegion	0	56.58	169.28	40.48	155.17	76.27	89.33	63.67
44	IG11_AR7	ActiveIntergenicRegion	0	0.68	4.30	2.11	10.74	2.15	1.29	1.47
45	IG11_SR7	SilentIntergenicRegion	0	0.86	4.14	1.43	10.13	1.59	1.14	1.19