Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 SAMD4B Gene 0 148.59 512.59 266.18 668.97 203.61 730.16 203.34 2 314471 Transcript 0 65.15 212.17 110.18 278.93 86.89 320.52 88.96 3 392067 Transcript 0 79.61 275.06 130.21 362.26 135.50 377.34 102.83 4 ER1a ExonRegion 0 6.15 52.14 13.77 90.65 53.19 84.44 13.47 5 E1a_E2a KnownJunction 0 0.00 7.15 1.26 10.19 1.18 8.60 4.33 6 E1a_E4a NovelJunction 1 5.72 51.91 10.00 60.01 8.28 39.02 29.74 7 E1a_E5a NovelJunction 0 0.83 86.22 6.11 79.27 2.07 68.77 3.11 8 I1 Intron 0 46.65 50.16 24.64 30.55 4.92 31.87 14.02 9 I1_AR1 ActiveIntronRegion 1 45.97 53.36 17.64 36.04 2.81 39.43 11.00 10 I1_SR2 SilentIntronRegion 1 69.25 68.24 27.87 54.89 5.12 57.79 10.26 11 I1_AR2 ActiveIntronRegion 0 116.03 82.18 56.11 47.05 9.90 60.19 22.50 12 I1_SR3 SilentIntronRegion 0 48.64 62.68 31.89 36.33 6.95 36.40 19.38 13 I1_AR3 ActiveIntronRegion 0 36.85 29.35 20.26 23.14 4.87 11.95 11.68 14 I1_SR4 SilentIntronRegion 0 34.46 36.04 18.49 19.27 5.00 17.57 13.77 15 ER2a ExonRegion 0 17.94 32.28 14.02 33.36 8.72 24.80 10.51 16 E2a_E3a KnownJunction 1 1.03 4.23 3.61 25.98 0.00 11.63 0.00 17 E2a_E4a NovelJunction 0 3.19 21.52 8.33 41.18 14.09 31.22 6.56 18 I2 Intron 0 50.25 46.58 27.76 23.59 9.68 18.75 18.42 19 I2_SR1 SilentIntronRegion 0 58.11 53.28 32.83 29.95 10.75 22.16 20.91 20 I2_AR1 ActiveIntronRegion 0 38.00 36.14 19.85 13.67 8.00 13.42 14.53 21 E3_Aa NovelBoundary 0 50.49 66.62 31.54 33.54 15.63 35.38 47.31 22 ER3a ExonRegion 1 44.64 69.61 21.93 68.37 10.70 72.29 26.41 23 E3_Da NovelBoundary 1 137.17 41.19 41.46 25.82 11.64 35.75 35.20 24 E3a_E4a KnownJunction 0 2.59 43.51 12.30 65.34 2.05 76.97 2.48 25 I3 Intron 1 47.95 25.80 23.28 11.43 9.85 17.61 11.19 26 I3_SR1 SilentIntronRegion 0 47.95 25.80 23.28 11.43 9.85 17.61 11.19 27 E4_Aa NovelBoundary 1 88.41 84.38 26.64 34.00 20.84 42.40 31.96 28 ER4a ExonRegion 0 24.01 116.77 31.88 133.55 23.49 135.44 40.08 29 E4a_E5a KnownJunction 0 51.22 189.73 51.37 203.81 40.13 195.26 81.39 30 I4_AR1 ActiveIntronRegion 1 33.12 36.79 11.60 6.30 4.25 10.33 5.12 31 I4_SR2 SilentIntronRegion 1 30.03 35.77 12.58 7.01 4.30 9.53 7.60 32 ER5a ExonRegion 0 88.63 410.70 129.63 443.13 92.23 479.64 108.96 33 E5_Ab KnownBoundary 0 101.21 495.51 153.29 558.48 108.97 615.89 129.53 34 ER5b ExonRegion 0 107.12 657.97 226.67 767.14 212.87 879.91 227.16 35 E5a_E6a KnownJunction 0 119.55 703.47 268.83 934.13 193.23 1073.89 330.35 36 ER6a ExonRegion 0 121.18 721.66 240.48 896.86 224.10 1004.04 256.34 37 E6a_E7a KnownJunction 0 176.50 714.92 357.55 893.95 395.29 1003.62 297.66 38 ER7a ExonRegion 0 143.86 656.03 294.21 854.57 217.80 823.09 273.41 39 E7a_E8a KnownJunction 0 191.58 835.41 406.12 1116.86 389.73 994.11 356.88 40 E7a_E9a NovelJunction 0 0.93 12.03 2.24 21.05 0.00 7.85 1.89 41 E8_Aa NovelBoundary 1 82.78 1.63 155.14 1.46 1.78 0.00 0.00 42 ER8a ExonRegion 0 200.69 877.16 464.90 1173.43 389.94 1034.72 420.66 43 E8a_E9a KnownJunction 0 196.06 832.46 380.40 1148.12 211.88 1039.40 383.64 44 ER9a ExonRegion 0 173.29 855.23 345.43 1115.69 219.88 1018.30 311.22 45 E9a_E10a KnownJunction 0 219.17 838.09 477.04 1027.59 305.29 1011.50 360.55 46 ER10a ExonRegion 0 154.50 661.17 340.28 889.13 254.27 801.95 276.75 47 E10a_E11a KnownJunction 0 173.68 849.43 354.14 1062.49 229.44 971.30 319.38 48 ER11a ExonRegion 0 155.57 850.22 352.88 1038.18 242.69 965.42 320.80 49 E11a_E12a KnownJunction 0 170.65 771.75 385.14 989.85 223.87 919.02 295.38 50 ER12a ExonRegion 0 182.75 748.08 395.88 964.84 306.21 986.23 331.92 51 E12a_E13a KnownJunction 0 140.26 547.60 293.87 780.14 261.86 773.87 249.08 52 ER13a ExonRegion 0 148.80 474.10 267.53 628.82 207.57 643.70 201.15 53 E13_Da NovelBoundary 0 147.56 472.02 273.19 669.29 282.77 654.18 200.74 54 E13a_E13b KnownJunction 0 79.61 275.06 130.21 362.26 135.50 377.34 102.83 55 E13b_E14a KnownJunction 0 168.50 416.74 277.00 623.61 206.32 599.48 217.34 56 ER13b ExonRegion 0 166.24 493.23 296.92 703.29 279.94 706.58 235.43 57 ER13c ExonRegion 0 166.84 500.21 284.75 705.13 238.85 699.32 227.81 58 ER14a ExonRegion 0 150.42 621.24 281.32 810.66 213.20 803.96 250.11 59 E14a_E15a KnownJunction 0 127.49 599.72 247.70 700.52 185.62 745.68 211.22 60 E15_Aa NovelBoundary 1 51.81 7.04 98.26 3.58 3.32 1.10 1.13 61 ER15a ExonRegion 0 134.86 593.35 273.05 728.45 185.05 778.01 224.55 62 ER15b ExonRegion 0 125.26 468.11 264.02 627.10 172.28 783.37 225.12 63 E15_Db NovelBoundary 0 89.98 314.18 133.90 264.76 148.44 318.97 126.27 64 E15b_E16a KnownJunction 0 88.09 324.43 207.03 463.26 164.99 653.46 183.13 65 I15 Intron 0 34.86 157.39 52.46 140.88 46.74 158.47 45.38 66 I15_AR1 ActiveIntronRegion 1 35.16 158.76 52.91 142.12 47.15 159.91 45.79 67 ER16a ExonRegion 0 231.15 546.34 384.63 758.04 280.63 934.25 225.13 68 IG36 Intergenic 0 80.09 407.50 131.58 569.75 139.75 784.21 126.93 69 IG36_AR1 ActiveIntergenicRegion 0 80.20 408.06 131.76 570.55 139.95 785.31 127.10