Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PHLDB3 Gene 0 14.19 59.30 9.98 41.40 7.98 30.78 11.77 2 314735 Transcript 0 4.29 3.27 3.08 2.07 4.30 0.76 1.79 3 292140 Transcript 0 23.68 90.80 16.28 63.23 8.92 50.00 19.90 4 ER1a ExonRegion 0 0.38 0.90 0.00 0.31 0.00 0.00 0.19 5 E1_Ab KnownBoundary 0 0.00 0.00 0.00 1.52 0.00 0.00 0.85 6 ER1b ExonRegion 0 3.79 10.24 1.20 6.20 0.33 2.68 0.55 7 E1a_E2a KnownJunction 0 2.67 6.83 0.00 3.63 0.00 3.03 0.00 8 E2_Aa NovelBoundary 1 6.09 17.79 1.06 10.48 0.00 1.66 0.80 9 ER2a ExonRegion 0 11.67 71.64 6.31 45.13 4.41 25.48 9.58 10 E2a_E3a KnownJunction 0 15.24 95.81 11.68 58.84 7.42 43.07 19.36 11 ER3a ExonRegion 0 11.77 121.61 10.42 74.61 7.48 56.26 14.71 12 E3a_E4a KnownJunction 0 11.50 122.79 12.83 85.63 5.21 57.70 19.78 13 E3a_E5a NovelJunction 0 0.00 2.92 0.00 6.47 0.00 10.08 0.00 14 ER4a ExonRegion 0 9.03 103.45 7.87 72.49 6.96 43.45 11.01 15 E4a_E5a KnownJunction 0 19.28 107.53 10.84 79.30 13.35 39.18 16.70 16 ER5a ExonRegion 0 14.71 127.80 17.98 99.45 14.42 64.23 23.40 17 E5a_E6a KnownJunction 0 23.22 119.85 28.09 104.46 13.46 72.20 27.01 18 ER6a ExonRegion 0 22.52 102.57 21.27 79.34 14.99 57.71 18.93 19 E6_Da KnownBoundary 0 3.55 2.63 5.12 0.00 1.84 1.34 5.42 20 E6a_E7a KnownJunction 0 0.90 2.39 0.00 1.14 0.00 0.00 0.73 21 ER6b ExonRegion 0 8.19 5.64 6.15 3.83 8.60 1.51 3.40 22 E6_Db NovelBoundary 0 116.81 92.61 104.85 119.91 72.13 111.17 63.14 23 I6 Intron 0 4.81 8.84 3.37 10.06 0.52 8.71 3.36 24 I6_SR1 SilentIntronRegion 0 5.55 9.36 3.84 8.34 0.51 7.93 3.89 25 I6_AR1 ActiveIntronRegion 1 1.65 6.67 1.37 17.76 0.57 12.23 1.08 26 E7_Aa NovelBoundary 1 3.79 10.19 2.82 24.30 1.08 17.53 1.48 27 ER7a ExonRegion 0 21.58 82.51 13.42 58.69 8.12 41.55 12.53 28 E7a_E8a KnownJunction 0 32.50 120.45 27.96 93.82 6.52 90.66 18.37 29 ER8a ExonRegion 0 36.65 128.54 29.17 89.93 13.08 63.27 26.00 30 E8a_E9a KnownJunction 0 41.59 118.59 24.33 79.16 13.92 58.80 28.79 31 ER9a ExonRegion 0 28.94 117.24 23.23 68.01 12.79 56.84 24.23 32 E9a_E10a KnownJunction 1 26.50 97.49 23.27 49.90 6.32 40.60 13.67 33 E9a_E11a NovelJunction 0 5.36 19.68 2.23 12.62 1.89 11.23 3.28 34 E10_Aa NovelBoundary 0 9.83 14.00 4.80 4.09 3.25 1.66 6.46 35 ER10a ExonRegion 0 27.13 93.33 17.97 58.62 6.58 39.11 16.14 36 E10_Da NovelBoundary 0 10.63 28.98 3.88 19.72 3.27 8.84 8.64 37 E10a_E11a KnownJunction 0 20.93 85.36 21.48 61.44 2.93 42.10 16.35 38 I10 Intron 1 5.16 12.01 2.90 4.91 1.31 1.83 2.33 39 I10_AR1 ActiveIntronRegion 1 5.22 12.16 2.93 4.96 1.32 1.84 2.36 40 E11_Aa NovelBoundary 0 5.37 21.07 7.10 12.90 1.18 5.60 9.69 41 ER11a ExonRegion 0 21.99 90.55 14.18 58.55 7.15 59.99 19.66 42 E11a_E12a KnownJunction 0 20.68 102.64 14.03 61.77 14.52 58.58 16.17 43 ER12a ExonRegion 0 15.01 64.08 10.61 45.54 6.36 37.84 13.74 44 E12_Da NovelBoundary 1 1.82 2.10 4.27 4.23 0.00 12.78 1.43 45 E12a_E13a KnownJunction 0 15.64 64.60 11.24 52.96 3.41 40.25 16.09 46 ER13a ExonRegion 0 12.42 53.26 8.97 47.03 6.28 29.55 13.70 47 E13a_E14a KnownJunction 0 6.04 19.36 1.25 14.74 4.20 4.15 6.84 48 ER14a ExonRegion 0 21.81 77.06 11.03 65.19 10.16 49.68 22.93 49 E14a_E15a KnownJunction 0 22.87 120.14 13.28 90.57 5.46 63.30 34.08 50 E14a_E16a NovelJunction 0 0.00 9.20 0.57 7.78 0.90 6.43 0.59 51 ER15a ExonRegion 0 42.99 158.72 24.53 114.55 17.44 95.86 43.06 52 E15a_E16a KnownJunction 0 42.94 146.52 27.26 102.24 26.95 80.72 40.46 53 ER16a ExonRegion 0 14.58 73.10 8.30 50.65 6.29 47.22 14.43 54 IG9_AR2 ActiveIntergenicRegion 0 10.38 5.97 9.67 1.60 2.45 2.82 8.56