Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PLEKHG2	Gene	0	83.31	54.89	30.76	43.16	81.48	50.19	42.24
2	409794	Transcript	0	12.19	18.52	8.49	18.47	10.13	17.35	8.56
3	378550	Transcript	0	0	0	0	0	0	0	0
4	205135	Transcript	0	0	0	0	0	0	0	0
5	409797	Transcript	0	6.66	5.03	3.51	2.39	5.04	7.14	1.41
6	IG39	Intergenic	0	11.20	6.32	23.49	19.15	0.17	12.77	0.48
7	IG39_AR1	ActiveIntergenicRegion	0	5.64	3.98	15.39	9.11	0.09	3.84	0.00
8	IG39_SR1	SilentIntergenicRegion	0	13.12	7.13	26.30	22.62	0.20	15.83	0.64
9	ER1a	ExonRegion	0	12.19	18.52	8.49	18.47	10.13	17.35	8.56
10	E1_Ab	KnownBoundary	0	29.22	45.79	27.63	42.94	34.86	50.06	32.40
11	ER1b	ExonRegion	0	15.77	29.85	12.35	22.84	16.63	28.82	18.05
12	E1a_E3a	KnownJunction	0	9.98	18.26	4.35	7.94	12.56	18.44	13.89
13	ER2a	ExonRegion	0	3.76	3.52	2.74	2.93	7.01	9.77	0.84
14	E2_Da	NovelBoundary	0	13.20	4.54	9.08	15.23	7.84	11.10	2.28
15	E2a_E3a	KnownJunction	0	0.87	3.07	0.00	1.14	0.00	0.00	0.00
16	ER3a	ExonRegion	1	17.33	32.12	10.37	11.49	26.79	16.58	18.29
17	E3a_E4a	KnownJunction	1	12.10	27.11	7.30	10.76	16.37	22.75	26.94
18	ER4a	ExonRegion	0	16.54	34.43	9.64	16.68	30.04	20.80	18.03
19	E4a_E5a	KnownJunction	0	16.56	34.42	10.38	23.41	36.86	14.28	19.79
20	ER5a	ExonRegion	1	17.72	42.69	11.49	17.52	33.27	17.93	18.80
21	E5a_E6a	KnownJunction	1	15.39	44.79	8.54	19.45	38.84	17.98	17.37
22	I5_AR4	ActiveIntronRegion	0	11.26	3.59	9.30	9.79	1.62	8.25	0.72
23	ER6a	ExonRegion	1	19.76	38.39	8.20	24.42	44.47	19.65	26.96
24	E6a_E7a	KnownJunction	1	20.76	29.92	9.00	24.71	45.92	16.86	27.96
25	ER7a	ExonRegion	1	19.18	32.18	8.52	21.04	63.62	16.64	31.09
26	E7a_E8a	KnownJunction	1	10.23	22.20	7.49	17.53	62.33	11.44	25.12
27	ER8a	ExonRegion	1	15.63	21.53	7.75	28.15	37.25	15.23	26.02
28	E8a_E9a	KnownJunction	1	21.45	26.32	7.40	26.60	43.39	9.67	31.83
29	ER9a	ExonRegion	1	18.75	26.43	8.41	17.50	47.74	13.35	32.12
30	E9a_E10a	KnownJunction	1	8.71	18.89	2.83	20.97	41.06	11.07	23.79
31	ER10a	ExonRegion	0	26.47	30.21	15.35	26.52	52.16	32.53	27.11
32	E10a_E11a	KnownJunction	0	55.91	43.56	29.03	41.58	139.52	57.83	41.30
33	ER11a	ExonRegion	0	68.42	57.19	42.27	60.30	79.67	62.51	47.98
34	E11a_E12a	KnownJunction	0	53.42	57.11	29.13	45.84	35.99	61.59	41.05
35	ER12a	ExonRegion	0	64.93	73.60	35.29	44.92	53.69	76.73	43.13
36	E12a_E13a	KnownJunction	0	55.36	49.34	30.19	42.18	87.23	60.06	37.13
37	E13_Aa	NovelBoundary	0	17.64	5.62	5.36	12.11	1.08	12.33	1.43
38	ER13a	ExonRegion	0	77.32	73.96	45.70	63.12	136.10	78.64	63.97
39	E13a_E14a	KnownJunction	0	90.34	66.15	42.88	50.61	173.29	69.76	60.62
40	E14_Aa	NovelBoundary	1	78.91	22.04	30.82	27.58	10.47	29.32	3.91
41	ER14a	ExonRegion	0	86.05	50.95	39.47	42.21	120.56	59.88	45.69
42	E14_Da	NovelBoundary	1	33.35	9.62	15.92	7.67	1.87	12.84	2.62
43	E14a_E15a	KnownJunction	1	25.54	37.10	16.86	21.10	66.67	60.27	32.86
44	E14a_E16a	NovelJunction	0	3.15	2.63	4.60	5.01	7.95	4.77	11.90
45	I14	Intron	1	18.35	1.92	2.68	0.00	1.26	1.93	0.53
46	I14_SR1	SilentIntronRegion	1	20.25	2.14	3.06	0.00	1.40	2.09	0.63
47	E15_Aa	NovelBoundary	1	34.77	8.25	15.40	7.69	4.33	11.36	1.46
48	ER15a	ExonRegion	0	19.18	23.51	15.51	18.26	63.02	40.94	31.68
49	E15_Da	NovelBoundary	1	28.91	9.88	8.35	7.80	4.47	7.42	2.08
50	E15a_E16a	KnownJunction	1	13.00	7.67	7.65	6.64	65.31	15.70	25.25
51	E16_Aa	NovelBoundary	1	32.28	10.80	6.94	9.43	5.33	11.10	3.71
52	ER16a	ExonRegion	0	28.27	26.35	18.53	21.20	81.46	30.59	33.52
53	E16a_E17a	KnownJunction	0	28.56	27.43	11.64	18.83	68.74	16.19	20.36
54	E17a_E18a	KnownJunction	0	40.47	32.29	24.00	28.66	80.87	50.73	33.42
55	ER17a	ExonRegion	0	43.21	40.02	27.37	30.51	101.33	48.25	42.94
56	E18_Aa	NovelBoundary	1	36.90	16.08	10.98	14.39	6.45	9.89	5.53
57	ER18a	ExonRegion	0	74.49	55.98	37.66	52.16	93.59	63.41	52.01
58	E18a_E19a	KnownJunction	0	74.04	56.93	37.74	51.26	118.93	52.26	58.53
59	E18a_E20b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	ER19a	ExonRegion	0	78.98	59.55	32.83	53.72	75.22	44.12	46.04
61	E19_Da	NovelBoundary	0	38.94	14.90	13.35	13.03	28.06	4.58	6.86
62	E19a_E20a	KnownJunction	0	61.39	32.16	19.95	34.78	38.84	38.75	39.53
63	I19	Intron	0	4.63	2.25	3.88	4.66	20.64	0.00	5.08
64	I19_AR1	ActiveIntronRegion	0	4.71	2.27	3.97	4.71	21.10	0.00	5.16
65	E20_Aa	NovelBoundary	0	39.59	19.15	19.44	23.08	50.67	16.72	18.19
66	ER20a	ExonRegion	0	166.98	90.64	53.43	65.40	157.00	90.44	75.02
67	E20_Ab	KnownBoundary	0	82.40	46.95	29.47	54.16	54.29	46.20	20.04
68	ER20b	ExonRegion	1	95.09	54.06	26.64	62.48	30.66	46.78	18.06
69	E20_Da	KnownBoundary	1	109.10	54.80	35.57	61.39	53.62	49.63	18.89
70	ER20c	ExonRegion	1	203.94	61.52	52.07	59.31	94.93	52.95	26.74
71	ER20d	ExonRegion	1	15.37	8.50	7.79	3.12	8.10	11.65	3.37
72	IG40	Intergenic	0	79.48	15.74	18.92	17.84	46.33	18.93	12.76
73	IG40_AR1	ActiveIntergenicRegion	0	211.31	39.14	43.98	39.27	128.32	41.61	35.18
74	IG40_SR1	SilentIntergenicRegion	0	9.47	2.86	5.16	5.94	1.67	6.10	0.56
75	IG40_AR2	ActiveIntergenicRegion	0	23.44	17.59	19.88	22.30	40.34	29.51	11.04