Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZNF585A	Gene	0	9.46	5.19	8.85	3.55	22.69	4.44	14.55
2	392159	Transcript	0	2.71	1.04	2.58	1.04	4.57	0.86	1.66
3	355533	Transcript	0	11.92	0.00	13.12	0.00	15.21	4.98	9.32
4	292841	Transcript	0	0	0	0	0	0	0	0
5	356958	Transcript	0	0	0	0	0	0	0	0
6	392157	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	IG30_AR3	ActiveIntergenicRegion	0	17.60	4.30	11.37	2.80	22.70	5.49	34.00
8	IG30_AR1	ActiveIntergenicRegion	0	33.37	7.39	20.21	4.77	44.38	15.26	49.50
9	ER1a	ExonRegion	0	0.00	0.00	0.53	0.00	1.62	0.00	2.84
10	ER1b	ExonRegion	0	50.67	14.93	20.67	9.24	93.64	18.08	82.55
11	E1a_E3a	KnownJunction	0	93.30	25.43	34.55	13.44	145.86	35.86	107.34
12	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	48.07	24.16	21.56	9.91	62.63	26.24	77.35
15	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER4a	ExonRegion	0	5.82	15.78	6.59	2.80	23.26	13.52	31.43
18	E4_Da	NovelBoundary	0	25.95	22.12	14.86	6.69	13.19	27.01	49.82
19	E4a_E5a	KnownJunction	0	1.60	6.88	0.00	0.00	3.07	1.61	3.77
20	ER5a	ExonRegion	0	1.77	6.05	3.01	0.98	8.85	1.77	6.97
21	E5a_E6a	KnownJunction	0	1.70	1.44	7.50	1.44	4.43	1.18	6.42
22	ER6a	ExonRegion	0	1.92	0.68	3.90	1.72	6.47	1.82	5.26
23	E6a_E7a	KnownJunction	0	2.10	0.00	2.08	1.46	4.31	5.98	4.03
24	E6a_E7d	KnownJunction	0	1.20	0.00	2.59	0.00	0.95	0.00	0.66
25	ER7a	ExonRegion	0	4.42	2.35	7.82	2.08	12.43	2.23	9.54
26	E7_Da	KnownBoundary	0	22.01	6.31	19.95	1.14	50.09	4.37	25.51
27	E7a_E7b	KnownJunction	0	11.92	0.00	13.12	0.00	15.21	4.98	9.32
28	ER7b	ExonRegion	0	6.45	2.88	8.57	1.92	11.51	3.73	11.88
29	ER7c	ExonRegion	0	1.59	5.04	2.98	1.32	4.55	0.96	5.62
30	E7_Ac	KnownBoundary	0	15.25	8.83	21.47	9.10	16.28	4.18	31.19
31	ER7d	ExonRegion	0	2.29	2.16	7.07	4.08	8.93	3.02	8.77
32	E7_Dc	KnownBoundary	0	23.88	9.17	24.31	9.54	23.93	17.50	27.30
33	ER7e	ExonRegion	0	10.13	2.63	14.67	2.56	26.58	4.47	16.12
34	E7_Ad	KnownBoundary	0	5.12	3.39	5.86	3.28	17.70	0.00	6.32
35	ER7f	ExonRegion	0	7.23	4.47	8.04	3.97	13.86	0.00	10.15
36	E7_Dd	KnownBoundary	0	7.53	5.75	5.91	3.17	12.66	0.00	11.61
37	E7d_E8a	KnownJunction	0	0.00	0.00	1.78	0.00	0.00	0.00	0.00
38	ER7g	ExonRegion	0	5.88	3.35	7.87	3.11	35.36	1.53	19.66
39	E7_De	NovelBoundary	0	0.00	2.63	3.25	2.55	4.06	3.56	7.81
40	I7_AR1	ActiveIntronRegion	0	2.66	1.34	3.06	0.95	14.04	1.18	6.93
41	Ix	Intron	0	8.01	2.95	15.27	3.39	18.43	4.44	2.05
42	Ix_AR1	ActiveIntronRegion	0	8.04	2.96	15.33	3.41	18.49	4.45	2.06
43	ER8a	ExonRegion	0	1.19	0.00	3.66	0.71	1.23	0.00	0.39
44	E8a_E9a	KnownJunction	0	0.00	0.00	0.83	0.00	0.00	0.00	0.00
45	E9_Aa	NovelBoundary	0	15.69	8.64	10.45	6.10	15.12	10.10	3.54
46	ER9a	ExonRegion	0	0.73	0.00	2.39	1.15	1.55	0.00	0.00
47	E9_Da	NovelBoundary	0	0.00	1.63	0.00	5.99	1.13	6.24	8.89
48	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER10a	ExonRegion	0	6.00	0.99	4.38	3.23	5.12	4.56	2.52
50	E10_Da	NovelBoundary	0	3.09	9.27	5.23	5.80	3.18	7.64	28.09
51	E10a_E11a	KnownJunction	0	0.67	0.00	0.00	0.00	0.00	0.00	0.00
52	E10a_E12a	NovelJunction	0	6.99	1.63	6.78	21.81	2.14	28.94	0.00
53	ER11a	ExonRegion	0	1.90	0.00	0.53	0.00	3.69	0.00	0.52
54	E11_Da	NovelBoundary	0	4.26	0.00	1.48	0.00	25.75	1.50	4.56
55	E11a_E12a	KnownJunction	0	3.69	0.00	3.18	0.00	0.00	0.00	1.78
56	ER12a	ExonRegion	0	17.16	11.50	11.07	7.42	40.70	5.80	11.21