Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SMARCA4	Gene	0	154.95	187.80	161.33	178.50	439.62	66.21	208.63
2	358026	Transcript	1	18.09	12.73	7.19	5.01	16.55	4.37	31.49
3	344626	Transcript	0	116.38	182.46	118.99	167.48	336.69	70.99	196.11
4	ER1a	ExonRegion	0	1.86	23.15	2.17	8.56	3.30	10.94	2.65
5	E1a_E2a	KnownJunction	1	3.59	58.45	4.53	40.23	1.94	31.78	17.68
6	ER2a	ExonRegion	0	54.15	131.41	62.17	115.30	58.24	68.28	67.26
7	E2a_E3a	KnownJunction	0	76.67	222.28	131.47	207.63	141.89	86.21	153.19
8	ER3a	ExonRegion	0	78.02	193.70	104.98	163.15	123.48	74.07	119.72
9	E3a_E4a	KnownJunction	0	83.90	188.92	101.71	149.73	117.87	106.93	126.43
10	ER4a	ExonRegion	0	88.60	175.58	121.44	144.89	176.11	65.41	132.67
11	E4a_E5a	KnownJunction	0	63.07	196.20	78.95	145.40	98.41	50.81	83.48
12	ER5a	ExonRegion	0	47.10	131.65	62.55	106.86	83.25	48.69	89.52
13	E5a_E6a	KnownJunction	0	74.15	154.82	103.85	116.11	158.05	69.28	136.97
14	ER6a	ExonRegion	0	44.51	91.10	53.78	82.23	117.97	29.89	66.11
15	E6a_E7a	KnownJunction	0	73.97	153.77	103.78	135.13	155.17	46.23	90.23
16	ER7a	ExonRegion	0	87.24	165.64	110.43	142.31	189.52	53.14	113.65
17	E7a_E8a	KnownJunction	0	90.14	163.59	111.92	166.75	207.96	50.20	145.23
18	ER8a	ExonRegion	0	136.72	211.67	164.49	202.78	357.71	65.88	204.60
19	E8a_E9a	KnownJunction	0	192.37	265.11	245.65	250.97	533.65	74.58	322.90
20	ER9a	ExonRegion	0	180.89	281.82	234.83	275.85	481.05	83.67	301.80
21	E9a_E10a	KnownJunction	0	187.71	239.36	244.74	262.89	434.78	73.43	295.11
22	ER10a	ExonRegion	0	121.70	223.09	150.12	207.89	311.57	69.38	160.87
23	E10a_E11a	KnownJunction	0	36.78	188.05	39.19	136.32	176.91	50.65	36.36
24	ER11a	ExonRegion	0	72.01	170.29	89.48	152.81	241.30	55.67	86.45
25	E11a_E12a	KnownJunction	0	115.58	146.65	150.08	155.77	247.22	53.76	148.26
26	ER12a	ExonRegion	0	131.06	175.81	171.82	159.91	352.98	48.94	174.49
27	E12a_E13a	KnownJunction	0	159.14	168.27	197.82	166.85	355.59	44.57	205.28
28	ER13a	ExonRegion	0	163.84	181.43	195.37	176.77	372.80	55.72	233.56
29	E13a_E14a	KnownJunction	0	120.40	181.33	163.02	175.85	406.63	64.53	250.54
30	ER14a	ExonRegion	0	157.82	221.61	197.30	227.68	601.94	82.39	284.35
31	E14a_E15a	KnownJunction	0	193.02	243.88	221.69	244.17	707.17	73.32	344.58
32	ER15a	ExonRegion	0	188.42	270.51	234.72	259.68	756.41	75.26	411.11
33	E15a_E16a	KnownJunction	0	192.02	293.37	245.70	286.65	797.21	74.40	424.22
34	ER16a	ExonRegion	0	194.64	276.30	235.49	294.35	893.41	62.19	416.81
35	E16a_E17a	KnownJunction	0	242.76	243.25	261.35	276.19	933.96	72.63	401.05
36	ER17a	ExonRegion	0	234.68	245.36	252.91	275.93	812.09	69.68	386.04
37	E17a_E18a	KnownJunction	0	221.56	260.46	213.59	253.00	732.67	68.58	332.09
38	ER18a	ExonRegion	0	295.13	271.12	267.90	282.33	959.89	82.14	434.98
39	E18a_E19a	KnownJunction	0	419.40	283.07	353.11	279.47	1193.26	112.83	494.10
40	ER19a	ExonRegion	0	349.51	301.34	287.18	275.53	945.37	94.21	417.80
41	E19_Da	NovelBoundary	1	105.00	1.10	74.35	0.00	0.00	0.00	0.00
42	E19a_E20a	KnownJunction	0	270.06	236.73	221.06	253.95	1194.60	73.94	338.47
43	ER20a	ExonRegion	0	312.98	270.08	284.73	262.06	1023.29	85.09	390.55
44	E20a_E21a	KnownJunction	0	213.93	290.93	220.46	250.59	600.96	99.37	380.93
45	ER21a	ExonRegion	0	249.27	269.27	215.81	242.83	663.35	77.09	372.13
46	E21a_E22a	KnownJunction	0	568.11	277.56	451.86	299.22	904.18	95.38	539.43
47	ER22a	ExonRegion	0	593.11	260.87	505.94	267.27	1567.27	104.72	523.94
48	E22a_E23a	KnownJunction	0	454.68	203.97	387.47	185.95	1024.31	96.53	314.13
49	ER23a	ExonRegion	0	426.69	248.01	331.73	237.00	746.98	93.20	319.79
50	E23a_E24a	KnownJunction	0	388.74	235.81	299.91	248.34	554.97	80.53	305.56
51	ER24a	ExonRegion	1	594.15	268.65	482.77	280.18	1040.05	107.14	354.61
52	E24a_E25a	KnownJunction	0	278.04	168.61	251.83	187.20	594.56	55.66	195.51
53	ER25a	ExonRegion	0	234.68	151.38	198.70	171.06	562.82	58.21	201.27
54	E25a_E26a	KnownJunction	0	130.01	176.18	137.52	149.22	583.51	67.59	235.25
55	E26_Aa	NovelBoundary	1	55.14	6.75	57.37	13.79	6.73	1.34	5.23
56	ER26a	ExonRegion	0	130.54	201.27	120.98	194.78	412.88	63.76	250.45
57	E26a_E27a	KnownJunction	1	13.77	58.43	22.98	33.40	32.69	7.13	32.19
58	E26a_E28a	NovelJunction	0	162.59	212.25	129.63	225.07	598.80	51.43	347.36
59	ER27a	ExonRegion	0	13.80	45.92	10.09	26.63	26.93	8.52	29.98
60	E27a_E28a	KnownJunction	0	22.55	46.37	13.82	22.24	27.48	15.36	26.83
61	ER28a	ExonRegion	0	97.72	175.94	101.96	144.25	468.59	56.32	196.07
62	E28a_E29a	KnownJunction	0	150.18	247.03	152.31	203.59	545.98	76.57	289.60
63	ER29a	ExonRegion	0	119.40	250.72	116.06	184.11	396.21	75.02	226.43
64	E29a_E30a	KnownJunction	1	18.18	13.71	10.07	2.93	16.62	4.42	34.15
65	E29a_E31a	KnownJunction	0	116.38	182.46	118.99	167.48	336.69	70.99	196.11
66	ER30a	ExonRegion	0	25.08	18.99	10.22	6.65	26.91	2.59	32.04
67	E30a_E31a	KnownJunction	1	11.02	5.49	1.26	5.45	6.11	6.08	28.28
68	ER31a	ExonRegion	0	125.05	198.53	135.54	196.29	455.19	75.88	197.95
69	E31a_E32a	KnownJunction	0	121.22	173.68	150.99	201.02	613.27	70.89	219.82
70	ER32a	ExonRegion	0	151.91	209.23	172.11	229.99	531.31	80.76	264.10
71	E32a_E33a	KnownJunction	0	164.65	215.22	195.03	241.87	651.31	94.17	327.76
72	E32a_E34a	NovelJunction	1	0.00	1.10	2.04	20.62	34.37	7.77	0.89
73	ER33a	ExonRegion	0	155.31	248.90	199.05	266.26	614.14	104.26	310.27
74	E33a_E34a	KnownJunction	0	151.44	217.66	176.44	256.28	618.83	83.21	264.46
75	ER34a	ExonRegion	0	147.29	226.21	182.47	239.15	606.01	91.90	249.51
76	E34a_E35a	KnownJunction	0	156.43	236.81	181.07	248.86	498.82	102.32	249.41
77	ER35a	ExonRegion	0	87.32	184.17	102.26	174.37	321.78	81.28	133.83
78	E35a_E36a	KnownJunction	0	191.60	196.30	189.03	226.81	573.69	111.51	216.83
79	ER36a	ExonRegion	0	106.95	107.46	135.29	115.24	321.85	61.70	105.58
80	IG3_AR1	ActiveIntergenicRegion	0	6.52	2.17	3.10	5.18	9.22	2.65	4.77
81	IG3_AR2	ActiveIntergenicRegion	0	15.07	15.43	19.90	23.23	2.45	5.30	2.31
82	IG3_SR3	SilentIntergenicRegion	0	10.47	17.05	11.94	20.55	2.37	4.77	0.20
83	IG3_AR3	ActiveIntergenicRegion	0	10.76	17.88	12.19	20.31	1.85	4.90	0.67
84	IG3_SR4	SilentIntergenicRegion	0	10.98	18.70	12.22	23.29	2.57	5.30	1.16
85	IG3_AR4	ActiveIntergenicRegion	0	8.46	13.47	8.97	18.13	1.48	4.84	1.18