Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PDE4A Gene 0 3.66 9.03 0.26 1.74 10.65 9.30 1.38 2 380702 Transcript 0 0.00 0.09 0.25 0.00 0.27 0.27 0.00 3 352831 Transcript 0 0.00 0.00 0.08 0.00 0.69 0.00 0.00 4 293683 Transcript 0 0.74 3.23 0.00 0.85 0.01 2.76 0.00 5 344979 Transcript 0 1.26 2.60 0.07 0.74 4.27 3.24 0.49 6 380686 Transcript 0 0.02 0.04 0.12 0.01 0.03 0.04 0.01 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.30 0.00 0.77 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.85 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 0.45 0.09 0.00 0.59 1.36 0.00 11 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER4a ExonRegion 0 0.00 0.00 0.16 0.00 0.30 0.00 0.00 13 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 1.08 0.00 0.00 14 ER5a ExonRegion 0 0.01 2.07 0.00 0.27 0.01 1.82 0.00 15 E5a_E6a KnownJunction 0 1.47 4.39 0.00 1.44 0.00 3.70 0.00 16 ER6a ExonRegion 0 2.72 8.92 0.07 1.13 2.63 7.80 1.33 17 E6a_E7a KnownJunction 0 7.96 12.19 0.72 0.00 1.96 11.31 0.66 18 ER7a ExonRegion 0 7.06 13.26 0.68 0.07 7.00 11.93 2.33 19 E7a_E8a KnownJunction 0 5.06 11.95 0.00 0.00 8.41 5.82 3.25 20 ER8a ExonRegion 0 3.91 13.96 0.19 2.34 7.94 14.21 3.97 21 E8a_E9a KnownJunction 0 2.29 12.87 0.00 2.41 4.36 15.36 3.11 22 ER9a ExonRegion 0 4.53 13.36 0.00 0.57 6.25 15.18 2.63 23 E9a_E10a KnownJunction 0 9.83 13.74 0.00 0.00 10.72 9.03 2.26 24 ER10a ExonRegion 0 13.29 15.98 0.43 1.71 12.16 13.91 2.69 25 E10a_E12a KnownJunction 0 6.89 15.50 0.00 4.31 4.50 19.86 5.35 26 ER11a ExonRegion 0 0.00 0.25 0.00 0.00 0.00 0.00 0.00 27 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER12a ExonRegion 0 8.18 14.13 0.03 1.90 7.79 20.50 2.73 29 E12a_E13a KnownJunction 0 13.69 10.40 0.00 0.00 13.14 12.22 0.75 30 ER13a ExonRegion 0 6.76 11.56 0.00 1.50 8.38 14.21 1.98 31 E13a_E14b KnownJunction 0 3.52 8.70 0.00 2.63 9.84 16.40 1.45 32 ER14a ExonRegion 0 0.05 0.11 0.35 0.02 0.09 0.13 0.02 33 E14_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER14b ExonRegion 0 4.89 10.91 0.00 1.39 9.31 10.20 1.08 35 E14a_E15a KnownJunction 0 6.96 13.98 0.00 0.00 9.61 9.09 1.38 36 ER15a ExonRegion 0 5.36 10.06 0.62 2.18 10.37 8.79 2.04 37 E15a_E16a KnownJunction 0 3.76 15.89 0.00 1.27 8.21 14.02 2.41 38 ER16a ExonRegion 0 4.46 12.14 0.39 2.03 10.58 11.00 1.83 39 E16a_E17a KnownJunction 0 3.84 13.71 0.70 2.49 17.08 5.36 2.42 40 E17_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 11.66 0.00 0.00 41 ER17a ExonRegion 0 5.95 14.22 0.08 2.65 23.34 14.39 1.34 42 E17a_E18a KnownJunction 0 4.19 11.53 0.00 1.35 20.22 13.11 1.55 43 ER18a ExonRegion 0 8.07 21.06 0.72 3.46 29.40 21.73 2.92 44 E18a_E19a KnownJunction 0 7.99 21.25 1.15 1.33 31.49 27.52 2.18 45 ER19a ExonRegion 0 5.56 26.06 0.87 4.49 27.21 20.53 2.69 46 E19_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E19a_E21a KnownJunction 0 6.66 14.84 0.89 5.80 22.94 10.61 2.85 48 ER19b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER20a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER21a ExonRegion 0 4.94 17.41 0.62 2.77 18.58 14.38 2.09 51 E21_Da KnownBoundary 0 2.02 8.75 0.79 1.38 18.05 9.89 1.39 52 ER21b ExonRegion 0 3.79 7.56 0.20 2.21 12.80 9.73 1.47