Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	USE1	Gene	0	32.70	87.26	55.12	86.75	23.06	109.45	54.27
2	263897	Transcript	0	50.85	102.58	69.95	90.44	17.08	116.92	67.71
3	379776	Transcript	0	0	0	0	0	0	0	0
4	IG25	Intergenic	0	4.03	4.03	3.21	7.04	0.58	14.63	2.37
5	IG25_SR1	SilentIntergenicRegion	0	0.81	1.91	0.92	3.33	0.09	9.23	1.06
6	IG25_AR2	ActiveIntergenicRegion	0	4.41	5.42	2.51	16.05	0.60	27.13	5.72
7	IG25_SR2	SilentIntergenicRegion	0	6.80	5.73	5.33	9.12	1.01	17.74	3.09
8	ER1a	ExonRegion	0	1.11	12.15	0.80	5.99	1.26	11.31	2.14
9	E1_Ab	KnownBoundary	0	6.04	28.98	13.82	22.40	7.33	34.36	15.12
10	ER1b	ExonRegion	0	6.31	45.97	19.54	61.63	4.09	58.44	15.73
11	E1a_E2a	KnownJunction	0	11.93	35.83	13.72	28.77	0.00	44.46	14.52
12	I1_AR1	ActiveIntronRegion	0	0.31	1.90	0.00	1.29	12.34	0.32	0.00
13	E2_Aa	NovelBoundary	0	10.40	7.43	2.97	1.68	24.39	2.84	9.92
14	ER2a	ExonRegion	0	19.01	55.20	19.31	51.05	9.98	81.68	23.30
15	E2a_E3a	KnownJunction	0	22.26	68.91	26.80	66.78	14.87	115.59	38.51
16	ER3a	ExonRegion	0	47.00	96.57	85.27	101.10	23.22	141.92	76.84
17	E3a_E4a	KnownJunction	0	46.93	118.33	120.55	118.77	34.97	170.18	102.44
18	ER4a	ExonRegion	0	30.06	95.97	48.33	92.64	26.76	121.13	56.68
19	E4a_E5a	KnownJunction	0	13.29	41.82	31.90	43.43	0.00	66.62	23.76
20	I4_AR1	ActiveIntronRegion	0	9.92	16.45	5.71	10.51	13.51	17.37	5.97
21	ER5a	ExonRegion	0	0.31	4.62	1.56	2.24	0.40	3.80	1.01
22	I5	Intron	0	10.29	21.20	10.27	11.99	13.12	17.49	6.67
23	I5_AR1	ActiveIntronRegion	0	10.33	21.27	10.31	12.03	13.16	17.55	6.69
24	E6a_E7a	KnownJunction	0	42.68	109.58	71.66	104.84	10.47	137.64	69.51
25	ER6a	ExonRegion	0	4.28	36.06	13.96	30.86	3.04	32.23	12.67
26	I6	Intron	0	5.45	5.48	5.68	6.17	12.20	12.13	1.65
27	I6_AR1	ActiveIntronRegion	0	7.97	7.97	7.85	9.03	12.83	17.75	2.41
28	I6_SR1	SilentIntronRegion	0	0.00	0.00	1.02	0.00	11.15	0.00	0.00
29	ER7a	ExonRegion	0	57.01	124.06	90.06	112.40	37.17	148.22	90.94
30	E7_Da	NovelBoundary	0	3.09	12.53	5.65	10.70	22.82	14.42	6.51
31	E7a_E8a	KnownJunction	0	102.61	164.54	117.26	138.54	19.41	170.50	108.23
32	I7	Intron	0	0.00	1.14	1.30	4.78	12.68	3.49	0.64
33	I7_SR1	SilentIntronRegion	0	0.00	1.15	1.32	4.84	12.84	3.53	0.65
34	E8_Aa	NovelBoundary	0	2.95	11.17	11.15	9.21	18.51	26.45	7.61
35	ER8a	ExonRegion	0	39.40	105.16	68.31	108.07	31.07	128.82	61.98
36	IG26_SR1	SilentIntergenicRegion	0	9.20	5.58	8.23	5.82	6.60	10.70	3.49
37	IG26_SR3	SilentIntergenicRegion	0	4.16	9.18	4.42	11.59	5.98	9.70	4.33
38	IG26_AR3	ActiveIntergenicRegion	0	8.88	8.38	6.29	11.71	6.88	13.32	4.47