Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ABCA7 Gene 0 22.99 10.87 7.52 6.64 22.79 1.17 28.67 2 263094 Transcript 0 23.37 10.45 7.42 6.90 23.53 1.05 28.38 3 ER1a ExonRegion 0 11.76 5.22 6.05 1.75 11.33 0.00 10.02 4 E1a_E2a KnownJunction 0 27.17 10.17 13.92 2.76 26.35 0.00 20.19 5 ER2a ExonRegion 0 17.99 7.77 9.57 3.97 9.35 0.92 22.80 6 E2a_E3a KnownJunction 0 20.18 7.62 11.90 3.36 15.70 1.37 24.49 7 ER3a ExonRegion 0 15.03 12.82 7.89 4.03 17.84 0.00 16.89 8 E3a_E4a KnownJunction 0 6.18 7.54 5.22 4.14 11.71 1.34 16.98 9 ER4a ExonRegion 0 7.22 8.47 4.35 3.84 9.28 0.00 12.91 10 E4a_E5a KnownJunction 0 12.95 10.51 6.73 1.35 13.67 1.58 9.49 11 ER5a ExonRegion 0 12.95 6.14 4.89 2.35 16.58 0.00 25.01 12 E5a_E6a KnownJunction 0 13.92 4.02 8.88 4.58 18.90 0.00 30.34 13 ER6a ExonRegion 0 10.37 6.09 4.84 1.73 13.66 0.00 26.44 14 E6_Da NovelBoundary 1 11.58 4.18 9.97 2.95 3.41 0.00 2.16 15 E6a_E7a KnownJunction 0 5.79 12.74 1.18 1.63 9.71 0.00 18.97 16 E7_Aa NovelBoundary 1 18.24 3.99 10.07 6.66 3.09 0.00 1.50 17 ER7a ExonRegion 0 19.87 8.44 4.62 5.22 10.75 0.00 20.11 18 E7a_E8a KnownJunction 0 26.79 5.60 14.15 3.82 13.46 0.00 26.43 19 ER8a ExonRegion 0 23.41 11.20 9.52 7.46 14.73 0.00 28.57 20 E8a_E9a KnownJunction 0 22.03 8.83 8.21 8.37 13.53 0.00 27.20 21 ER9a ExonRegion 0 23.48 10.46 11.05 6.82 17.60 0.53 28.06 22 E9a_E10a KnownJunction 0 28.37 5.91 10.79 11.43 26.88 1.26 44.27 23 ER10a ExonRegion 0 26.28 11.53 14.01 5.97 20.81 2.56 39.73 24 E10a_E11a KnownJunction 0 20.11 13.16 11.93 1.68 14.66 0.00 33.48 25 ER11a ExonRegion 0 28.70 12.87 9.60 4.46 18.15 1.85 38.26 26 E11a_E12a KnownJunction 0 29.82 11.19 9.28 2.76 18.56 2.95 39.15 27 ER12a ExonRegion 0 34.45 10.41 11.04 5.76 21.90 1.55 36.77 28 E12a_E13a KnownJunction 0 45.40 8.14 12.57 9.13 22.18 4.13 36.53 29 ER13a ExonRegion 0 28.51 13.93 8.14 6.15 18.59 2.54 33.60 30 E13a_E14a KnownJunction 0 20.11 13.35 7.93 1.63 24.60 0.00 39.08 31 ER14a ExonRegion 0 19.94 12.26 8.58 4.84 21.92 2.53 35.87 32 E14a_E15a KnownJunction 0 20.55 13.53 8.77 9.86 19.76 0.00 29.28 33 ER15a ExonRegion 0 20.68 9.20 8.00 6.87 15.94 1.86 22.66 34 E15a_E16a KnownJunction 0 13.10 11.17 3.48 6.34 13.83 1.66 16.57 35 ER16a ExonRegion 0 15.33 7.48 6.36 4.76 13.91 0.21 22.39 36 E16a_E17a KnownJunction 0 21.05 8.07 6.97 3.47 12.15 0.00 25.74 37 ER17a ExonRegion 0 32.48 6.06 11.58 4.41 24.09 0.00 37.74 38 E17a_E18a KnownJunction 0 14.84 2.78 3.66 0.00 13.51 0.00 22.87 39 ER18a ExonRegion 0 18.98 7.11 5.90 1.15 13.48 0.00 26.52 40 E18_Da NovelBoundary 1 0.70 0.00 0.89 0.00 0.00 0.00 12.77 41 E18a_E19a KnownJunction 0 21.05 8.28 6.81 3.82 18.60 0.00 27.70 42 ER19a ExonRegion 0 19.44 15.23 6.91 6.00 17.78 0.71 24.23 43 E19a_E20a KnownJunction 0 24.52 20.18 7.44 6.07 24.48 0.00 30.40 44 ER20a ExonRegion 0 25.03 19.76 8.39 10.55 30.62 0.69 30.14 45 E20a_E21a KnownJunction 0 24.67 27.14 8.94 18.23 30.36 1.47 32.86 46 ER21a ExonRegion 0 22.65 16.26 8.08 11.44 29.79 3.09 33.75 47 E21a_E22a KnownJunction 0 36.05 10.25 7.50 5.28 49.79 5.95 40.06 48 ER22a ExonRegion 0 17.98 11.28 5.99 6.31 26.63 2.62 26.96 49 E22a_E23a KnownJunction 0 26.55 17.34 3.62 4.88 23.70 2.09 36.34 50 ER23a ExonRegion 0 14.41 17.89 3.44 5.86 18.96 0.62 25.46 51 E23a_E24a KnownJunction 0 13.60 17.81 4.93 4.55 18.81 1.58 26.83 52 ER24a ExonRegion 0 11.78 11.27 3.18 6.51 22.32 0.88 26.78 53 E24a_E25a KnownJunction 0 18.84 10.88 5.89 13.95 24.78 1.42 30.27 54 ER25a ExonRegion 0 27.10 9.05 9.94 15.57 32.72 1.65 34.60 55 E25a_E26a KnownJunction 0 38.90 2.81 9.71 16.80 43.27 1.29 36.36 56 ER26a ExonRegion 0 33.58 11.45 6.47 10.47 29.30 1.80 34.28 57 E26a_E27a KnownJunction 0 26.40 11.53 4.89 12.87 24.34 1.26 27.14 58 ER27a ExonRegion 0 17.80 9.58 6.66 6.75 18.45 1.01 18.87 59 E27a_E28a KnownJunction 0 27.39 5.52 6.41 9.27 24.23 1.18 27.20 60 ER28a ExonRegion 0 20.24 6.45 8.03 5.89 19.16 0.13 29.18 61 E28a_E29a KnownJunction 0 17.42 8.28 8.42 6.34 31.74 0.00 20.08 62 ER29a ExonRegion 0 16.32 7.71 7.43 4.85 18.85 0.27 22.16 63 E29a_E30a KnownJunction 0 23.23 8.91 8.18 4.66 17.45 1.42 23.06 64 ER30a ExonRegion 0 22.67 7.85 5.53 2.25 16.56 1.05 25.28 65 E30a_E31a KnownJunction 0 27.44 4.28 5.43 8.67 9.57 0.00 28.75 66 ER31a ExonRegion 0 29.83 12.26 7.72 6.16 20.81 1.23 25.84 67 E31a_E32a KnownJunction 0 21.18 15.16 9.11 4.39 26.56 1.63 14.78 68 ER32a ExonRegion 0 41.27 16.68 10.58 7.50 35.75 0.65 37.33 69 E32a_E33a KnownJunction 0 38.89 18.42 2.10 5.42 39.03 1.15 33.28 70 ER33a ExonRegion 0 31.05 18.29 7.40 7.94 31.78 0.63 38.44 71 E33a_E34a KnownJunction 0 35.80 7.30 6.32 10.24 37.07 0.00 30.37 72 ER34a ExonRegion 0 30.31 14.63 10.90 11.13 45.26 1.32 40.55 73 E34a_E35a KnownJunction 0 19.26 14.87 7.83 13.06 26.00 1.66 24.23 74 E34a_E37a NovelJunction 0 0.67 0.00 0.83 0.00 0.00 0.00 8.11 75 ER35a ExonRegion 0 37.16 12.74 15.07 12.70 56.05 1.70 46.99 76 E35a_E36a KnownJunction 0 34.65 11.22 11.55 12.43 62.13 1.58 49.39 77 ER36a ExonRegion 0 29.94 11.87 8.25 12.95 35.95 1.52 41.12 78 E36a_E37a KnownJunction 0 39.56 10.04 11.14 12.49 32.25 0.00 48.23 79 ER37a ExonRegion 0 25.15 12.89 7.91 9.70 44.85 0.75 36.17 80 E37a_E38a KnownJunction 0 16.37 7.09 6.81 2.93 27.06 0.00 27.60 81 ER38a ExonRegion 0 22.88 13.06 8.63 7.52 29.34 1.40 31.18 82 E38a_E39a KnownJunction 0 17.89 7.99 7.19 5.96 15.17 1.55 24.66 83 ER39a ExonRegion 0 23.70 13.48 6.91 7.52 29.88 1.66 29.86 84 E39a_E40a KnownJunction 0 24.90 13.14 16.48 8.72 58.21 1.15 35.48 85 ER40a ExonRegion 0 32.69 10.43 10.42 9.90 41.84 1.81 31.31 86 E40a_E41a KnownJunction 0 28.82 8.09 4.47 11.41 28.75 1.63 27.44 87 E41_Aa NovelBoundary 1 4.64 0.00 1.35 0.00 0.00 0.00 13.44 88 ER41a ExonRegion 0 30.20 9.08 4.24 8.82 30.15 0.53 34.19 89 E41_Da NovelBoundary 1 4.22 0.00 1.35 4.17 0.99 0.00 11.01 90 E41a_E42a KnownJunction 0 31.38 8.41 6.54 7.61 13.65 0.00 31.41 91 E42_Aa NovelBoundary 0 8.19 1.02 0.66 3.14 0.00 0.00 9.00 92 ER42a ExonRegion 0 29.73 9.53 4.50 6.02 32.48 0.66 34.35 93 E42_Da NovelBoundary 0 4.04 0.00 0.53 1.38 1.01 0.00 7.68 94 E42a_E43a KnownJunction 0 26.34 6.83 2.13 6.72 20.63 0.00 22.37 95 I42 Intron 1 1.59 0.30 1.01 0.16 3.44 0.31 8.32 96 I42_SR1 SilentIntronRegion 1 2.59 0.00 1.52 0.81 4.35 0.00 10.44 97 I42_AR1 ActiveIntronRegion 1 3.07 0.00 1.60 0.00 2.94 0.00 14.96 98 I42_SR2 SilentIntronRegion 1 1.31 0.39 0.87 0.00 3.24 0.39 7.69 99 ER43a ExonRegion 0 25.36 8.12 4.85 7.70 22.99 0.00 20.20 100 E43a_E44a KnownJunction 0 23.18 9.93 4.31 6.31 23.08 0.00 16.80 101 ER44a ExonRegion 0 18.21 8.04 2.78 6.02 18.75 1.39 16.19 102 E44a_E45a KnownJunction 0 15.57 0.00 1.52 6.91 17.68 1.66 22.94 103 ER45a ExonRegion 0 17.82 6.19 4.44 7.87 14.46 0.44 15.31 104 E45a_E46a KnownJunction 0 14.15 9.48 3.05 5.55 9.80 0.00 12.78 105 ER46a ExonRegion 0 17.68 9.71 4.58 8.49 14.60 3.16 19.28 106 E46a_E47a KnownJunction 0 31.11 10.17 4.63 10.27 23.40 2.97 35.36 107 ER47a ExonRegion 0 20.72 8.38 6.16 7.93 21.21 2.86 19.98