Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZNF397OS	Gene	0	18.53	6.89	22.37	4.56	31.39	3.74	20.72
2	383091	Transcript	0	6.00	1.34	2.32	3.93	6.73	2.26	10.26
3	333206	Transcript	0	16.06	5.38	22.15	2.86	34.71	3.06	17.90
4	360932	Transcript	0	0.23	0.25	0.31	0.92	4.14	0.21	2.91
5	ER1a	ExonRegion	0	3.98	1.47	2.19	0.71	9.47	1.49	7.00
6	E1a_E2a	KnownJunction	0	0.72	0.00	0.86	0.00	0.00	0.00	2.04
7	ER2a	ExonRegion	0	8.96	8.98	9.84	5.01	15.97	3.12	13.80
8	E2_Ab	KnownBoundary	0	11.67	13.42	8.78	10.40	23.88	4.82	11.04
9	ER2b	ExonRegion	0	10.89	5.92	11.21	3.93	20.54	4.44	19.36
10	E2a_E3a	KnownJunction	0	9.50	4.36	9.21	1.03	22.06	4.61	23.95
11	E2b_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER2c	ExonRegion	0	0.12	0.00	0.00	0.00	0.81	0.00	0.00
13	ER3a	ExonRegion	0	12.67	6.75	16.28	3.32	27.41	3.95	23.09
14	E3a_E4a	KnownJunction	1	7.04	1.34	0.65	2.79	6.62	2.81	11.75
15	E3a_E6b	KnownJunction	0	4.62	1.08	7.87	0.00	19.20	1.47	4.16
16	ER4a	ExonRegion	0	4.96	1.34	3.99	5.07	6.84	1.70	8.77
17	E4_Da	NovelBoundary	0	112.06	85.46	120.75	48.76	83.57	82.70	116.11
18	I4	Intron	0	12.24	3.17	12.62	1.97	15.48	1.94	11.74
19	I4_AR1	ActiveIntronRegion	0	18.03	4.57	17.84	2.61	20.63	2.70	17.53
20	E5_Aa	NovelBoundary	0	11.58	1.47	4.76	0.00	12.49	1.45	4.96
21	ER5a	ExonRegion	0	0.21	0.00	0.18	1.25	3.77	0.00	3.17
22	E5a_E6a	KnownJunction	0	0.00	1.44	0.00	3.09	8.74	0.00	7.28
23	E6_Ab	NovelBoundary	0	25.15	2.68	28.09	4.85	24.69	6.59	15.01
24	ER6a	ExonRegion	0	1.02	0.08	1.67	1.16	11.50	1.27	6.99
25	ER6b	ExonRegion	0	17.36	6.34	21.37	3.25	41.80	3.68	19.37
26	E6_Da	KnownBoundary	0	32.36	11.43	30.34	7.88	55.81	10.21	17.57
27	E6a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E6_Ac	KnownBoundary	0	25.94	11.53	33.60	10.24	44.47	6.54	22.04
29	ER6c	ExonRegion	0	22.61	9.72	30.87	4.99	47.38	3.15	23.56
30	ER6d	ExonRegion	0	28.70	10.00	34.25	6.47	43.77	4.03	24.37
31	E6_Db	KnownBoundary	0	23.92	8.67	30.01	3.58	36.33	5.65	25.28
32	ER6e	ExonRegion	0	20.94	5.33	27.69	3.58	37.56	4.56	25.97