Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TGIF	Gene	0	419.83	468.37	568.36	487.95	424.91	710.99	154.59
2	401449	Transcript	0	0.15	0.04	1.12	0.44	0.70	1.60	0.35
3	345133	Transcript	0	7.06	9.33	12.91	11.47	18.19	7.60	5.30
4	405385	Transcript	1	4.64	16.49	12.87	9.41	5.18	17.84	35.18
5	407501	Transcript	0	2.84	9.17	5.19	8.26	2.24	18.52	3.04
6	343820	Transcript	0	0	0	0	0	0	0	0
7	340165	Transcript	0	0	0	0	0	0	0	0
8	330513	Transcript	1	23.59	43.41	31.62	124.92	25.54	235.58	3.28
9	400167	Transcript	1	29.56	10.36	21.44	47.27	8.77	25.39	0.56
10	ER1a	ExonRegion	0	0.00	0.00	0.17	0.47	0.06	1.73	0.13
11	E1a_E2a	KnownJunction	0	0.00	0.00	0.89	1.06	1.04	1.58	0.89
12	ER2a	ExonRegion	0	0.00	0.17	1.45	0.22	1.72	1.43	0.37
13	E2a_E8a	KnownJunction	0	0.62	0.00	1.98	0.00	0.00	1.66	0.00
14	ER3a	ExonRegion	0	9.52	13.27	21.80	18.59	24.34	7.08	5.37
15	E3a_E8a	KnownJunction	0	4.59	5.39	4.02	4.36	12.03	8.12	5.23
16	E4_Aa	NovelBoundary	0	33.16	43.09	93.06	47.33	10.79	56.98	49.30
17	ER4a	ExonRegion	0	3.37	5.46	9.62	6.89	6.22	12.88	14.02
18	E4_Ab	KnownBoundary	0	9.75	20.26	28.30	15.82	9.45	36.42	36.73
19	ER4b	ExonRegion	1	7.83	29.65	19.70	14.86	9.30	30.42	44.94
20	E4a_E5b	KnownJunction	0	2.84	9.17	5.19	8.26	2.24	18.52	3.04
21	E4a_E8a	KnownJunction	1	5.91	27.53	16.11	11.92	4.15	22.81	56.35
22	ER5a	ExonRegion	0	84.82	184.18	134.78	165.23	171.79	157.81	51.93
23	E5_Ab	KnownBoundary	0	56.63	264.11	110.75	154.64	85.09	175.16	33.42
24	ER5b	ExonRegion	0	188.22	559.89	336.26	455.13	315.36	494.94	128.55
25	E5a_E8a	KnownJunction	0	243.37	824.11	457.90	561.06	721.28	657.00	171.15
26	ER6a	ExonRegion	0	32.57	36.17	31.49	47.53	19.92	64.26	4.85
27	E6a_E8a	KnownJunction	1	14.60	50.65	31.74	202.32	31.17	406.90	1.72
28	I6_SR1	SilentIntronRegion	0	86.89	31.30	87.35	29.42	13.33	13.79	9.35
29	E7_Aa	NovelBoundary	1	152.88	56.43	129.71	120.12	10.19	40.39	16.93
30	ER7a	ExonRegion	0	27.23	9.06	20.54	38.46	15.72	19.51	0.56
31	E7a_E8a	KnownJunction	1	31.89	11.66	22.35	56.08	1.82	31.28	0.56
32	I7	Intron	0	98.35	34.78	85.92	24.65	16.41	13.24	11.64
33	I7_SR1	SilentIntronRegion	0	93.60	30.04	89.95	23.98	12.09	13.20	9.38
34	I7_AR1	ActiveIntronRegion	0	85.25	30.94	94.02	16.71	9.93	12.59	16.33
35	I7_AR2	ActiveIntronRegion	0	100.92	37.18	83.95	25.08	18.61	13.28	12.72
36	ER8a	ExonRegion	0	718.22	1350.27	1034.76	1301.73	845.92	1771.02	400.90
37	E8a_E9a	KnownJunction	0	1034.44	1299.73	1213.78	1301.40	1114.14	1788.13	339.02
38	ER9a	ExonRegion	0	982.85	903.13	1308.33	979.86	942.44	1506.11	322.40
39	IG27_AR3	ActiveIntergenicRegion	0	0.45	1.60	1.52	2.42	7.72	1.04	0.89