Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PTPN2	Gene	0	490.88	146.50	465.08	193.71	173.47	191.59	101.42
2	399900	Transcript	0	0.00	0.00	0.14	0.46	0.00	0.00	0.00
3	309660	Transcript	0	0	0	0	0	0	0	0
4	353319	Transcript	1	1.03	1.31	8.23	9.35	0.00	4.45	0.00
5	327283	Transcript	0	839.09	236.65	802.84	371.72	220.13	315.35	180.95
6	341361	Transcript	1	122.01	64.93	37.39	32.00	7.35	31.06	4.12
7	ER1a	ExonRegion	0	79.06	32.79	72.96	57.25	34.62	45.16	16.23
8	E1a_E2a	KnownJunction	0	109.12	99.46	156.41	112.24	32.04	125.40	36.26
9	ER2a	ExonRegion	0	289.75	155.45	358.62	261.46	133.29	223.10	108.77
10	E2a_E4a	KnownJunction	0	570.60	165.75	649.86	280.34	282.81	266.42	176.23
11	E3_Aa	NovelBoundary	1	207.54	62.24	55.89	57.35	6.45	55.42	14.82
12	ER3a	ExonRegion	1	77.67	56.18	29.69	23.83	7.42	29.10	4.91
13	E3a_E4a	KnownJunction	1	166.35	73.69	45.09	40.18	7.28	33.02	3.34
14	ER4a	ExonRegion	0	844.82	356.48	765.58	410.30	329.89	385.27	199.25
15	E4a_E5a	KnownJunction	0	661.56	345.10	691.92	368.36	261.60	361.31	163.78
16	E5_Aa	NovelBoundary	1	236.08	2.68	256.70	0.00	1.01	0.00	0.00
17	ER5a	ExonRegion	0	843.64	336.36	872.77	413.56	309.59	339.77	213.02
18	E5a_E6a	KnownJunction	0	1232.00	366.70	1069.00	476.45	461.08	344.54	246.30
19	E5a_E7a	NovelJunction	0	12.90	4.52	17.56	16.82	9.75	11.77	4.53
20	ER6a	ExonRegion	0	798.98	274.48	917.22	333.27	354.81	305.03	192.64
21	E6a_E7a	KnownJunction	0	646.02	166.06	887.84	309.30	309.62	281.80	146.18
22	E6a_E8a	NovelJunction	0	19.23	2.76	22.69	11.92	8.55	7.32	4.94
23	ER7a	ExonRegion	0	1122.31	272.93	1077.28	397.80	396.77	381.72	208.71
24	E7a_E8a	KnownJunction	0	1631.41	362.55	1393.76	471.06	401.79	540.63	215.90
25	ER8a	ExonRegion	0	1540.61	361.20	1364.85	480.77	423.39	516.65	221.53
26	E8a_E9a	KnownJunction	0	1272.51	288.20	1171.63	393.71	404.44	435.12	168.51
27	ER9a	ExonRegion	0	1022.34	333.92	1071.07	472.09	378.45	459.98	214.16
28	E9a_E11a	KnownJunction	0	1089.04	337.40	1053.76	429.04	387.89	517.50	200.98
29	E9a_E12a	KnownJunction	0	1.03	1.31	8.23	9.35	0.00	4.45	0.00
30	ER10a	ExonRegion	0	0.00	0.00	0.14	0.46	0.00	0.00	0.00
31	ER11a	ExonRegion	0	1083.25	345.27	984.97	449.77	417.64	441.30	232.91
32	E11_Da	KnownBoundary	0	376.12	47.16	183.49	50.90	149.80	29.43	41.65
33	E11a_E12a	KnownJunction	0	839.09	236.65	802.84	371.72	220.13	315.35	180.95
34	ER11b	ExonRegion	0	178.85	28.97	119.99	23.87	60.51	20.34	31.16
35	I11	Intron	1	23.13	9.17	22.76	5.80	17.35	3.57	29.83
36	I11_AR2	ActiveIntronRegion	1	17.38	7.42	18.29	4.04	11.82	1.76	23.75
37	I11_SR2	SilentIntronRegion	1	17.59	7.06	18.04	3.28	9.25	2.06	24.35
38	I11_AR3	ActiveIntronRegion	1	25.74	10.46	25.67	6.88	20.68	4.39	35.62
39	E12_Aa	NovelBoundary	1	21.66	15.79	24.20	7.67	21.53	10.45	39.24
40	ER12a	ExonRegion	0	393.63	153.22	441.82	237.11	133.62	288.84	112.92