Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PTPRM Gene 0 52.51 16.79 64.12 66.73 19.38 100.88 164.37 2 332175 Transcript 0 13.93 9.30 14.39 21.13 2.98 41.52 31.98 3 400053 Transcript 0 0.00 0.01 0.08 0.47 0.00 0.00 0.00 4 400060 Transcript 1 10.96 7.75 13.68 21.44 3.15 18.81 18.29 5 IG41_AR7 ActiveIntergenicRegion 0 4.96 3.56 4.48 16.39 0.52 20.86 10.12 6 ER1a ExonRegion 0 11.37 9.57 14.12 20.12 3.63 33.81 29.19 7 E1a_E3a KnownJunction 0 29.64 18.34 28.50 43.02 5.33 89.78 65.67 8 ER2a ExonRegion 0 0.00 0.02 0.17 0.94 0.00 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 33.53 31.12 43.30 70.27 8.12 93.53 67.29 11 E3a_E5b KnownJunction 0 13.75 9.93 26.59 31.83 4.31 52.69 44.64 12 E4a_E5a KnownJunction 0 19.61 15.95 23.25 33.16 4.20 23.02 29.39 13 ER4a ExonRegion 0 1.54 0.00 1.19 1.87 1.21 4.29 1.86 14 ER5a ExonRegion 0 11.72 7.29 16.60 29.30 4.05 29.12 23.61 15 ER5b ExonRegion 0 67.22 26.61 87.77 87.83 14.87 121.17 104.44 16 E5a_E6a KnownJunction 0 55.09 12.01 69.57 57.76 16.62 101.25 96.68 17 ER6a ExonRegion 0 41.22 16.05 70.92 80.25 14.73 87.71 111.50 18 E6a_E7a KnownJunction 0 31.91 18.23 76.28 90.40 18.30 83.35 118.28 19 ER7a ExonRegion 0 27.14 19.57 52.53 78.40 13.30 83.36 104.20 20 E7a_E8a KnownJunction 1 22.21 25.54 62.12 97.85 13.44 92.08 105.87 21 ER8a ExonRegion 0 36.10 24.86 72.81 87.44 15.81 106.00 162.88 22 E8a_E9a KnownJunction 0 41.07 28.14 71.32 73.96 23.86 104.01 164.88 23 ER9a ExonRegion 0 41.53 20.62 51.73 68.23 13.21 92.91 131.97 24 E9a_E10a KnownJunction 0 106.05 27.82 98.78 88.37 22.22 121.54 208.55 25 ER10a ExonRegion 0 87.32 26.37 94.15 87.73 20.99 127.95 237.40 26 E10a_E11a KnownJunction 0 54.88 19.10 84.27 74.34 18.07 92.41 224.37 27 ER11a ExonRegion 0 70.55 15.12 97.51 74.22 23.84 100.54 231.34 28 E11a_E12a KnownJunction 1 76.67 5.23 106.34 63.72 20.77 107.09 232.71 29 ER12a ExonRegion 0 69.24 12.91 102.07 73.00 21.82 112.00 238.72 30 E12a_E13a KnownJunction 0 45.61 13.27 75.03 63.96 22.36 103.26 205.28 31 ER13a ExonRegion 0 55.35 20.79 84.57 67.20 24.63 85.89 211.48 32 E13a_E14a KnownJunction 0 60.05 15.87 70.49 60.44 16.14 64.80 199.65 33 ER14a ExonRegion 0 90.86 19.88 90.86 61.37 21.87 84.74 193.00 34 E14a_E15a KnownJunction 0 82.00 14.27 71.10 46.03 30.48 78.63 115.77 35 ER15a ExonRegion 0 70.99 18.35 66.91 62.62 26.07 96.29 110.49 36 E15a_E16a KnownJunction 0 40.62 13.27 42.21 61.63 16.67 98.19 91.84 37 ER16a ExonRegion 0 75.75 11.66 84.15 56.13 26.26 95.73 161.61 38 E16a_E17a KnownJunction 0 76.56 16.31 89.20 43.05 28.79 74.10 179.56 39 ER17a ExonRegion 0 63.50 11.80 66.14 58.91 20.56 94.45 198.37 40 E17a_E18a KnownJunction 0 57.40 16.87 49.48 47.08 18.05 55.74 147.33 41 ER18a ExonRegion 0 59.76 12.41 63.61 70.25 31.31 81.93 208.36 42 E18a_E19a KnownJunction 0 38.79 9.25 42.87 59.06 27.29 64.61 173.28 43 E18a_E20a NovelJunction 0 5.59 0.00 3.94 9.40 0.00 10.26 1.45 44 ER19a ExonRegion 0 29.27 10.34 31.48 47.94 15.38 49.90 132.89 45 E19a_E20a KnownJunction 0 21.70 5.39 31.36 37.82 17.29 70.46 134.30 46 ER20a ExonRegion 0 35.71 12.09 37.46 54.72 19.40 87.52 157.84 47 E20a_E21a KnownJunction 0 46.60 16.66 42.74 66.83 32.14 88.06 188.56 48 ER21a ExonRegion 0 69.41 14.56 78.79 64.76 29.80 97.84 231.04 49 E21a_E22a KnownJunction 0 75.10 10.14 84.61 42.13 36.33 96.37 220.12 50 ER22a ExonRegion 0 72.13 17.63 88.17 78.36 35.24 115.77 250.91 51 E22a_E23a KnownJunction 0 46.83 16.47 58.99 86.15 24.51 79.54 172.15 52 ER23a ExonRegion 0 73.12 19.74 82.30 73.67 23.76 116.06 215.28 53 E23a_E24a KnownJunction 0 96.53 19.47 103.52 71.11 26.93 119.02 233.10 54 ER24a ExonRegion 0 76.94 17.12 84.60 66.07 30.73 96.99 210.42 55 E24a_E25a KnownJunction 0 50.00 13.45 49.48 61.23 25.45 78.47 134.67 56 ER25a ExonRegion 0 31.39 6.27 37.04 49.75 15.97 68.28 128.00 57 E25a_E26a KnownJunction 0 27.15 9.35 31.54 60.87 10.17 70.19 152.63 58 ER26a ExonRegion 1 23.49 9.68 43.28 82.69 20.71 88.59 164.96 59 E26_Da NovelBoundary 0 14.22 1.26 8.05 11.35 0.90 5.90 37.66 60 E26a_E27a KnownJunction 1 17.64 13.48 31.17 91.32 33.43 90.90 157.65 61 I26 Intron 0 34.57 1.65 28.34 10.56 2.82 8.72 38.61 62 I26_AR1 ActiveIntronRegion 0 34.62 1.65 28.37 10.57 2.82 8.73 38.65 63 E27_Aa NovelBoundary 1 28.92 1.00 22.94 17.04 6.22 29.37 58.74 64 ER27a ExonRegion 0 50.01 20.13 76.89 87.10 27.77 113.82 265.20 65 E27a_E28a KnownJunction 0 59.05 24.72 79.60 82.79 28.79 119.31 243.10 66 ER28a ExonRegion 0 61.13 21.73 71.39 92.66 31.52 119.82 271.35 67 E28a_E29a KnownJunction 1 62.25 9.54 81.16 112.56 53.07 147.56 276.73 68 ER29a ExonRegion 0 53.97 13.16 72.05 90.81 29.09 124.01 222.23 69 E29a_E30a KnownJunction 1 58.53 13.19 73.17 106.82 22.20 127.49 239.94 70 ER30a ExonRegion 0 59.63 16.84 65.78 100.62 28.81 132.93 225.15 71 E30a_E31a KnownJunction 0 49.25 18.81 75.83 102.70 13.99 135.98 192.21 72 ER31a ExonRegion 0 35.61 18.50 38.19 68.59 18.85 109.94 158.59 73 E31a_E32a KnownJunction 0 30.39 15.18 23.02 43.02 17.34 76.22 125.47 74 ER32a ExonRegion 0 44.02 20.86 43.69 64.62 22.79 109.29 172.98 75 E32a_E33a KnownJunction 0 43.94 22.07 49.79 61.31 33.15 122.74 175.60 76 ER33a ExonRegion 0 56.88 16.11 67.13 62.07 19.84 150.71 154.51 77 ER33b ExonRegion 0 0.77 0.00 0.54 0.25 0.00 0.98 1.08