Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MPPE1	Gene	0	50.69	28.03	31.11	12.22	86.36	22.60	85.17
2	317251	Transcript	0	0	0	0	0	0	0	0
3	399978	Transcript	0	12.04	1.86	0.95	0.17	5.51	0.00	3.82
4	309976	Transcript	0	0	0	0	0	0	0	0
5	317235	Transcript	0	2.72	0.00	1.60	0.00	0.00	1.15	4.53
6	344987	Transcript	1	12.34	5.47	2.85	0.31	10.05	1.07	22.61
7	IG12_AR1	ActiveIntergenicRegion	0	1.72	20.38	0.37	1.79	0.00	6.62	0.41
8	ER1a	ExonRegion	0	1.12	4.96	0.55	1.89	0.27	3.89	0.56
9	E1_Ab	KnownBoundary	0	0.65	4.18	2.26	2.52	1.84	5.90	2.22
10	ER1b	ExonRegion	1	37.03	15.42	9.02	4.36	30.94	5.96	27.01
11	E1a_E2a	KnownJunction	0	15.94	11.93	8.94	6.45	9.64	4.90	11.69
12	ER2a	ExonRegion	0	39.61	19.51	17.29	5.43	16.36	13.51	47.33
13	E2a_E3a	KnownJunction	0	39.29	14.55	11.68	2.82	46.24	6.54	49.87
14	I2_AR5	ActiveIntronRegion	0	12.92	4.59	5.99	3.24	19.37	1.11	17.87
15	ER3a	ExonRegion	0	47.37	19.93	17.57	3.54	42.73	11.72	59.43
16	E3a_E4a	KnownJunction	0	55.49	22.23	20.08	8.24	35.71	11.87	61.30
17	ER4a	ExonRegion	1	62.22	30.72	18.77	4.15	55.52	14.76	71.10
18	E4a_E5a	KnownJunction	1	50.65	32.73	14.03	4.96	57.86	8.79	55.81
19	ER5a	ExonRegion	1	52.45	41.53	16.15	7.37	63.48	23.29	80.17
20	E5a_E6a	KnownJunction	1	58.28	50.94	15.42	6.20	60.19	27.26	89.53
21	ER6a	ExonRegion	1	53.64	54.72	19.08	3.18	64.74	24.06	93.01
22	E6_Da	NovelBoundary	1	0.77	0.00	3.20	0.00	0.85	9.22	0.63
23	E6a_E7a	KnownJunction	1	54.06	47.79	21.60	4.50	49.98	26.37	89.83
24	E7_Da	NovelBoundary	0	21.90	18.97	10.71	3.96	23.84	6.97	44.67
25	ER7a	ExonRegion	1	57.04	53.02	18.22	2.49	52.12	30.77	104.82
26	E7_Ab	KnownBoundary	1	20.43	15.08	2.33	0.00	19.46	13.43	44.57
27	ER7b	ExonRegion	1	54.87	54.43	16.12	2.49	51.18	26.97	109.82
28	ER7c	ExonRegion	1	47.51	36.53	13.21	2.24	66.86	20.68	92.63
29	E7_Db	NovelBoundary	0	28.16	17.89	10.61	2.60	42.12	9.43	44.16
30	E7c_E8a	KnownJunction	1	10.28	4.57	1.29	0.00	5.33	0.00	17.40
31	E7c_E8b	KnownJunction	0	11.32	9.17	8.65	1.57	33.66	10.40	37.19
32	E7c_E9a	NovelJunction	0	1.84	1.21	1.42	0.00	8.99	0.00	10.06
33	E7c_E10a	KnownJunction	0	2.72	0.00	1.60	0.00	0.00	1.15	4.53
34	ER7d	ExonRegion	1	31.84	18.57	13.45	2.49	48.94	9.81	69.19
35	E8_Aa	NovelBoundary	1	1.35	0.00	0.00	2.87	2.77	8.20	2.24
36	ER8a	ExonRegion	1	14.41	6.38	4.40	0.62	14.78	2.15	27.83
37	ER8b	ExonRegion	1	24.25	23.14	9.95	0.58	37.40	7.00	63.99
38	E8_Da	NovelBoundary	0	2.60	6.73	0.89	1.27	6.82	8.76	2.22
39	E8a_E9a	KnownJunction	1	27.74	32.13	7.24	0.00	22.94	7.64	63.59
40	ER9a	ExonRegion	1	39.18	30.07	12.42	4.22	42.53	15.98	74.89
41	E9_Da	NovelBoundary	1	6.33	0.00	4.05	1.46	13.83	9.27	8.05
42	E9a_E10a	KnownJunction	1	40.62	22.38	12.53	2.74	34.86	9.11	65.58
43	ER10a	ExonRegion	1	50.41	30.28	12.11	8.74	43.34	19.34	68.51
44	E10_Da	NovelBoundary	0	2.72	5.81	3.72	6.04	6.89	10.08	10.89
45	E10a_E12a	KnownJunction	1	41.77	33.42	8.08	5.74	34.97	32.59	93.34
46	I10	Intron	1	11.74	4.51	27.90	8.51	108.52	24.29	88.30
47	I10_AR1	ActiveIntronRegion	1	11.78	4.52	27.98	8.53	108.84	24.36	88.55
48	ER11a	ExonRegion	0	12.04	1.86	0.95	0.17	5.51	0.00	3.82
49	I11	Intron	1	10.03	9.86	17.34	7.30	77.16	15.97	84.43
50	I11_AR1	ActiveIntronRegion	1	10.07	9.90	17.42	7.34	77.50	16.04	84.81
51	E12_Aa	NovelBoundary	1	4.89	8.09	27.96	17.93	100.69	21.63	208.82
52	ER12a	ExonRegion	0	58.63	30.22	46.22	11.52	184.88	35.42	197.22
53	E12_Da	KnownBoundary	1	24.17	7.96	26.51	2.79	149.64	12.81	110.21
54	ER12b	ExonRegion	0	80.30	39.41	69.49	35.93	135.25	38.10	71.91
55	IG11	Intergenic	0	7.95	4.54	53.94	6.15	133.10	17.67	141.99
56	IG11_AR1	ActiveIntergenicRegion	0	7.96	4.54	54.01	6.16	133.27	17.69	142.18