Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PPP4R1	Gene	0	336.99	318.97	274.01	235.78	259.61	109.57	353.71
2	400556	Transcript	0	0.00	0.88	0.24	0.12	0.06	0.00	0.00
3	400555	Transcript	1	24.67	74.16	19.70	37.09	33.20	19.86	56.25
4	285124	Transcript	0	0	0	0	0	0	0	0
5	IG50_AR3	ActiveIntergenicRegion	0	8.00	13.53	4.06	4.34	1.45	0.36	3.33
6	IG50_AR2	ActiveIntergenicRegion	0	3.96	8.26	2.55	3.30	0.93	0.02	2.02
7	ER1a	ExonRegion	0	0.00	0.88	0.24	0.12	0.06	0.00	0.00
8	E1_Ab	KnownBoundary	0	0.00	0.00	0.66	1.41	0.00	0.00	0.00
9	E1_Ac	KnownBoundary	0	3.79	6.15	3.98	5.04	1.01	0.00	0.70
10	ER1b	ExonRegion	0	0.07	3.53	1.79	1.47	0.88	0.00	0.12
11	ER1c	ExonRegion	0	17.09	32.91	16.53	37.75	14.93	6.15	24.14
12	E1a_E2a	KnownJunction	1	28.91	47.42	26.59	58.27	45.76	12.11	44.84
13	ER2a	ExonRegion	0	41.07	95.62	39.47	71.24	54.01	21.93	62.17
14	E2a_E3a	KnownJunction	0	21.61	50.84	23.93	32.18	29.51	12.97	18.20
15	E2a_E3b	KnownJunction	1	24.67	74.16	19.70	37.09	33.20	19.86	56.25
16	ER3a	ExonRegion	0	43.06	67.75	33.15	53.84	34.34	15.99	30.02
17	E3_Ab	KnownBoundary	0	63.96	72.59	44.92	66.83	38.43	17.15	40.77
18	ER3b	ExonRegion	0	120.26	191.57	118.82	148.33	108.31	52.83	150.87
19	E3a_E4a	KnownJunction	0	165.66	232.53	180.71	180.45	123.29	81.18	207.71
20	ER4a	ExonRegion	0	265.44	322.44	233.70	225.06	184.63	98.17	257.23
21	E4a_E5a	KnownJunction	0	349.15	333.67	264.92	241.76	240.40	113.58	336.86
22	ER5a	ExonRegion	0	531.87	432.67	398.39	296.53	290.39	147.38	398.78
23	E5a_E6a	KnownJunction	0	441.40	397.07	339.99	307.16	285.60	145.58	356.12
24	ER6a	ExonRegion	0	475.24	364.28	320.79	260.19	314.59	120.83	393.12
25	E6a_E7a	KnownJunction	0	380.45	340.45	288.74	246.58	257.75	106.29	363.52
26	E6a_E8a	NovelJunction	1	39.29	11.82	5.59	12.62	0.88	2.87	0.70
27	E6a_E10a	NovelJunction	0	12.17	11.90	10.36	20.37	2.35	4.61	2.84
28	ER7a	ExonRegion	0	375.11	380.35	317.85	251.03	301.68	100.76	385.81
29	E7a_E8a	KnownJunction	0	535.25	456.36	384.64	273.48	332.21	115.37	396.64
30	ER8a	ExonRegion	0	509.29	412.85	406.07	258.31	316.21	108.91	412.00
31	E8a_E9a	KnownJunction	0	383.33	318.83	358.01	214.59	249.59	78.42	347.48
32	ER9a	ExonRegion	0	330.15	271.72	299.35	199.33	228.29	85.48	309.45
33	E9a_E10a	KnownJunction	0	258.58	295.16	272.66	187.33	187.65	92.81	313.26
34	ER10a	ExonRegion	0	281.27	308.22	302.70	202.50	189.97	92.21	328.14
35	E10a_E11a	KnownJunction	0	305.46	286.78	328.82	197.11	214.67	90.23	371.74
36	I10_AR1	ActiveIntronRegion	0	121.25	47.06	78.11	17.44	14.48	5.05	29.41
37	E11_Aa	NovelBoundary	1	173.64	34.52	179.84	17.91	46.87	5.20	21.58
38	ER11a	ExonRegion	0	325.58	336.07	329.60	239.40	214.35	105.22	365.67
39	E11a_E12a	KnownJunction	0	248.58	270.52	250.17	192.64	216.30	103.34	313.21
40	ER12a	ExonRegion	0	333.36	323.48	299.22	210.71	276.98	101.06	390.10
41	E12a_E13a	KnownJunction	0	282.21	219.31	260.52	187.88	317.97	101.33	438.80
42	ER13a	ExonRegion	0	322.24	339.01	305.18	250.73	354.33	95.17	500.86
43	E13a_E14a	KnownJunction	0	437.89	388.74	373.37	316.61	436.46	105.46	564.10
44	ER14a	ExonRegion	0	424.57	380.34	323.04	299.63	366.85	103.82	526.44
45	E14a_E15a	KnownJunction	0	405.45	319.88	323.61	266.01	366.10	111.22	442.21
46	E15_Aa	NovelBoundary	1	182.05	0.00	136.56	2.90	0.00	1.02	2.85
47	ER15a	ExonRegion	0	471.45	285.54	361.76	229.19	339.71	91.25	394.70
48	E15a_E16a	KnownJunction	0	508.89	290.30	417.34	218.63	304.74	114.09	415.60
49	ER16a	ExonRegion	0	579.71	317.93	437.53	238.33	302.52	121.57	437.62
50	E16a_E17a	KnownJunction	0	539.59	346.55	380.25	258.75	229.08	137.11	440.78
51	ER17a	ExonRegion	0	474.02	354.01	372.67	247.18	311.43	132.04	468.35
52	E17a_E18a	KnownJunction	0	455.03	330.65	284.76	225.64	311.58	152.60	435.85
53	ER18a	ExonRegion	0	330.61	324.13	230.87	253.08	328.25	127.12	420.78
54	E18a_E19a	KnownJunction	0	264.07	315.18	199.55	266.20	418.46	143.11	463.23
55	E19_Aa	NovelBoundary	1	106.58	10.67	89.93	9.48	1.18	5.23	10.73
56	ER19a	ExonRegion	0	432.43	398.86	302.92	314.11	406.94	169.17	505.29
57	E19a_E20a	KnownJunction	0	550.72	424.31	278.99	312.14	510.02	148.18	382.45
58	ER20a	ExonRegion	0	301.87	330.26	225.24	256.39	265.41	129.85	332.53
59	ER20b	ExonRegion	0	0.38	0.00	1.35	0.31	0.61	0.31	0.84