Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	L3MBTL4	Gene	0	27.00	20.31	44.42	30.44	9.51	9.74	0.35
2	400104	Transcript	0	7.36	2.26	5.79	2.90	17.22	1.72	1.10
3	284898	Transcript	0	0	0	0	0	0	0	0
4	317931	Transcript	0	17.71	4.10	17.20	7.67	2.86	3.32	0.00
5	400105	Transcript	0	0.00	0.01	0.02	0.01	0.01	0.00	0.00
6	ER1a	ExonRegion	0	4.63	5.64	4.68	3.52	0.79	3.23	0.00
7	E1a_E3a	KnownJunction	0	7.38	8.59	2.67	2.93	0.00	4.64	0.00
8	ER2a	ExonRegion	0	0.00	0.02	0.04	0.02	0.01	0.00	0.00
9	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER3a	ExonRegion	0	7.88	12.21	13.74	27.79	3.86	9.77	0.00
11	E3a_E4a	KnownJunction	1	7.73	14.27	19.63	46.71	2.26	16.70	0.00
12	ER4a	ExonRegion	0	22.61	27.25	24.94	34.88	6.00	16.89	0.00
13	E4a_E5a	KnownJunction	0	26.74	24.75	31.76	41.53	6.04	24.47	0.00
14	ER5a	ExonRegion	0	19.49	31.48	29.60	32.78	6.60	17.90	0.00
15	E5a_E6a	KnownJunction	0	14.42	36.60	24.88	26.39	5.37	12.06	0.00
16	E5a_E7a	NovelJunction	1	0.00	0.00	6.50	9.45	0.00	0.00	0.00
17	ER6a	ExonRegion	0	22.82	28.80	33.92	40.77	7.45	13.61	0.00
18	E6a_E7a	KnownJunction	0	29.86	16.08	40.55	41.61	9.82	10.40	0.00
19	ER7a	ExonRegion	0	38.03	26.26	56.47	49.88	9.59	12.28	0.00
20	E7a_E8a	KnownJunction	1	32.16	32.63	52.72	59.63	3.92	8.31	0.00
21	ER8a	ExonRegion	1	39.22	34.95	63.84	44.70	9.25	7.56	0.80
22	E8a_E9a	KnownJunction	0	58.13	27.80	73.45	35.33	8.55	5.55	0.59
23	ER9a	ExonRegion	0	70.02	32.07	88.77	39.23	10.03	8.09	0.84
24	E9a_E10a	KnownJunction	0	61.70	24.38	83.49	38.36	3.20	17.90	0.83
25	ER10a	ExonRegion	0	61.84	32.95	92.34	48.82	9.78	21.24	1.08
26	E10a_E11a	KnownJunction	0	53.17	34.18	78.91	40.61	11.78	22.78	2.34
27	ER11a	ExonRegion	0	38.67	29.31	82.97	34.19	10.94	17.53	1.38
28	E11a_E12a	KnownJunction	0	27.02	27.09	76.31	28.66	7.77	13.94	0.00
29	ER12a	ExonRegion	0	36.70	32.36	76.28	31.10	8.62	8.68	0.05
30	E12a_E13a	KnownJunction	0	38.34	41.04	67.33	29.29	5.79	15.87	0.00
31	ER13a	ExonRegion	0	32.43	35.58	71.37	32.97	16.34	12.08	0.89
32	E13a_E14a	KnownJunction	0	43.49	36.33	69.70	32.62	11.37	8.60	0.00
33	ER14a	ExonRegion	0	31.91	35.95	53.38	46.41	10.37	8.45	0.00
34	E14a_E15a	KnownJunction	1	18.59	33.97	57.11	55.13	8.35	5.82	0.00
35	ER15a	ExonRegion	0	33.02	32.32	59.64	43.96	11.66	11.58	0.06
36	E15a_E16a	KnownJunction	0	29.93	25.09	53.27	37.47	18.56	12.65	0.00
37	ER16a	ExonRegion	0	26.27	23.02	51.99	39.67	11.21	10.55	0.44
38	E16a_E17a	KnownJunction	1	20.86	15.13	44.42	36.25	9.59	2.79	0.87
39	ER17a	ExonRegion	1	22.85	11.65	32.25	24.48	8.95	2.37	0.29
40	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	0.00	0.00
41	E17a_E19a	KnownJunction	0	1.94	0.00	0.62	0.00	0.00	0.00	0.00
42	E17a_E20a	KnownJunction	0	17.71	4.10	17.20	7.67	2.86	3.32	0.00
43	E18a_E20a	KnownJunction	0	0.68	1.42	0.60	0.00	0.00	0.00	0.00
44	ER18a	ExonRegion	0	0.28	1.03	0.28	1.34	0.03	0.00	0.00
45	ER19a	ExonRegion	0	12.79	4.53	10.96	5.81	34.43	3.43	2.20
46	E19_Da	NovelBoundary	0	168.97	131.94	109.52	98.42	15.45	91.95	76.07
47	ER20a	ExonRegion	0	12.06	12.28	16.52	24.59	4.03	5.96	0.00
48	E20a_E21a	KnownJunction	0	4.52	8.72	13.26	22.92	5.51	4.56	0.00
49	ER21a	ExonRegion	0	9.09	11.86	14.36	22.47	6.77	4.18	0.00
50	E21a_E22a	KnownJunction	0	12.37	14.82	19.85	25.01	10.95	3.00	0.00
51	ER22a	ExonRegion	0	25.92	17.00	43.95	28.86	8.67	9.81	0.18
52	ER22b	ExonRegion	0	0.00	0.00	1.35	0.00	0.00	0.00	0.00
53	IG34_AR5	ActiveIntergenicRegion	0	0.33	0.84	0.44	5.13	1.10	19.98	0.00
54	IG34_AR4	ActiveIntergenicRegion	0	0.00	0.00	0.27	5.97	0.20	11.55	0.00
55	IG34_AR3	ActiveIntergenicRegion	0	0.49	1.53	3.11	20.81	3.60	32.94	0.00
56	IG34_AR1	ActiveIntergenicRegion	0	0.96	0.99	5.63	9.14	9.14	21.79	0.00