Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SMAD4	Gene	0	89.78	74.28	119.62	58.86	163.52	77.27	58.20
2	342988	Transcript	0	32.43	46.84	44.67	23.93	55.38	56.26	17.95
3	398417	Transcript	0	26.19	28.51	34.54	16.24	63.69	32.91	20.42
4	IG45_SR3	SilentIntergenicRegion	0	8.91	6.94	14.09	3.99	4.00	3.08	1.17
5	ER1a	ExonRegion	0	0.72	19.45	0.63	13.95	2.02	10.38	6.33
6	E1_Da	NovelBoundary	0	1.03	28.90	0.65	23.98	2.21	18.20	0.00
7	I1	Intron	0	8.38	24.73	8.93	16.45	20.87	18.21	2.95
8	I1_AR1	ActiveIntronRegion	0	8.41	24.89	8.98	16.56	20.98	18.34	2.96
9	E2a_E3b	KnownJunction	0	79.43	93.58	106.79	48.98	114.96	115.29	36.52
10	ER2a	ExonRegion	1	17.13	27.49	26.59	8.87	49.16	43.09	11.02
11	ER3a	ExonRegion	0	18.44	34.02	32.85	12.47	53.45	43.52	12.48
12	ER3b	ExonRegion	0	226.53	239.99	353.98	156.39	310.96	206.33	116.04
13	E3a_E4a	KnownJunction	0	218.57	255.23	380.02	150.19	456.75	171.63	156.74
14	ER4a	ExonRegion	0	303.04	280.69	487.58	209.67	600.58	265.78	225.42
15	E4a_E5a	KnownJunction	0	153.31	230.35	281.89	196.55	368.80	250.60	187.70
16	E5a_E6a	KnownJunction	0	120.80	210.04	213.37	154.91	307.02	147.13	133.05
17	ER5a	ExonRegion	0	162.19	290.59	315.28	222.13	363.84	259.58	216.21
18	ER6a	ExonRegion	0	226.10	239.17	349.40	196.70	616.30	239.08	210.48
19	E6a_E7a	KnownJunction	0	190.27	177.28	258.95	146.64	221.51	198.00	139.76
20	E6a_E9a	NovelJunction	0	6.18	9.33	8.97	11.87	13.14	14.07	7.85
21	ER7a	ExonRegion	0	141.56	218.09	194.90	144.38	289.54	186.08	121.83
22	E7a_E8a	KnownJunction	0	185.53	196.56	260.78	155.88	462.53	180.98	143.70
23	ER8a	ExonRegion	0	154.57	191.81	232.50	159.14	443.18	174.96	150.15
24	E8a_E9a	KnownJunction	0	79.91	140.42	127.01	113.57	247.20	131.77	82.23
25	ER9a	ExonRegion	0	79.90	154.74	141.40	119.27	280.95	120.51	94.47
26	E9a_E10a	KnownJunction	0	86.99	148.54	136.22	109.94	309.32	97.04	92.71
27	ER10a	ExonRegion	0	114.48	182.47	180.73	135.86	290.92	135.56	116.34
28	E10a_E11a	KnownJunction	0	99.56	183.19	155.16	137.16	269.00	129.09	94.32
29	ER11a	ExonRegion	0	114.01	164.81	169.51	160.70	300.44	137.46	112.15
30	E11a_E12a	KnownJunction	0	110.25	144.60	153.65	153.61	283.71	153.24	86.25
31	E12_Aa	NovelBoundary	1	34.65	1.23	45.37	1.54	1.18	0.00	1.78
32	ER12a	ExonRegion	0	93.85	143.08	128.97	121.25	225.27	152.48	79.12
33	E12a_E13a	KnownJunction	0	128.85	116.44	174.36	98.75	264.21	147.40	77.35
34	ER13a	ExonRegion	0	195.87	111.30	251.45	90.10	259.02	154.11	79.03
35	E13_Da	KnownBoundary	0	70.90	47.50	80.80	38.52	83.70	29.10	30.65
36	ER13b	ExonRegion	0	33.95	23.00	36.22	20.01	73.94	22.29	28.36