Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MBD1	Gene	0	100.18	148.70	145.92	245.84	79.42	172.71	303.25
2	349085	Transcript	0	0	0	0	0	0	0	0
3	269471	Transcript	0	10.98	29.45	25.05	46.49	4.74	25.14	34.90
4	269468	Transcript	0	0	0	0	0	0	0	0
5	353909	Transcript	0	0	0	0	0	0	0	0
6	398495	Transcript	0	88.72	80.94	113.02	85.38	44.33	59.40	116.27
7	398493	Transcript	0	0	0	0	0	0	0	0
8	382948	Transcript	0	25.52	36.12	32.68	70.04	28.34	42.29	76.76
9	339998	Transcript	0	6.31	2.37	5.29	2.45	8.06	1.23	4.97
10	347968	Transcript	0	0	0	0	0	0	0	0
11	398488	Transcript	0	0	0	0	0	0	0	0
12	ER1a	ExonRegion	0	2.41	0.00	1.77	6.80	5.42	0.45	5.17
13	E1_Ab	KnownBoundary	0	6.13	0.00	2.11	7.61	5.37	0.00	9.60
14	ER1b	ExonRegion	0	5.25	3.07	2.90	13.59	10.46	2.31	16.73
15	E1_Ac	KnownBoundary	0	9.21	11.22	10.27	34.46	26.05	15.79	41.49
16	ER1c	ExonRegion	0	18.49	61.88	28.45	96.21	23.88	43.99	84.27
17	E1a_E2a	KnownJunction	1	8.18	66.78	24.47	112.70	17.15	77.08	115.31
18	E2_Ab	NovelBoundary	1	14.19	91.19	31.20	144.86	18.60	101.52	96.95
19	ER2a	ExonRegion	1	9.66	89.67	20.11	134.24	20.46	86.10	95.25
20	ER2b	ExonRegion	0	49.57	134.57	74.96	207.71	29.98	132.50	181.61
21	E2a_E3a	KnownJunction	0	72.52	161.02	139.49	223.61	79.37	180.42	267.78
22	ER3a	ExonRegion	0	75.06	230.66	151.95	330.49	109.37	234.10	432.63
23	E3a_E4a	KnownJunction	0	69.08	236.34	133.97	349.83	50.00	211.66	372.12
24	ER4a	ExonRegion	0	122.16	303.01	206.02	415.84	108.89	303.50	563.85
25	E4a_E5a	KnownJunction	0	115.71	253.49	227.08	451.31	114.02	261.19	629.22
26	ER5a	ExonRegion	0	168.34	328.32	289.56	454.30	147.47	346.44	719.56
27	E5a_E6a	KnownJunction	0	162.48	303.22	290.21	418.07	197.40	371.31	669.09
28	ER6a	ExonRegion	0	144.69	273.70	268.48	396.81	153.75	313.44	659.82
29	E6a_E7a	KnownJunction	0	98.00	198.14	185.88	285.84	107.61	192.74	443.36
30	E6a_E8a	KnownJunction	1	0.00	4.65	5.73	20.10	4.22	13.02	33.03
31	I6	Intron	0	29.04	29.78	31.32	39.16	13.10	21.36	43.90
32	I6_SR1	SilentIntronRegion	0	31.12	26.48	34.61	39.85	14.11	22.94	46.92
33	I6_AR1	ActiveIntronRegion	0	26.52	34.61	27.20	38.66	11.89	19.43	40.27
34	ER7a	ExonRegion	0	113.04	199.85	172.25	314.67	110.62	212.76	532.31
35	E7a_E8a	KnownJunction	0	123.22	181.67	210.48	284.54	112.22	166.75	552.82
36	ER8a	ExonRegion	0	117.11	217.50	191.03	351.17	119.04	246.46	520.38
37	E8a_E9a	KnownJunction	0	1.69	8.38	1.37	11.73	44.58	4.26	3.74
38	E8a_E10a	KnownJunction	0	97.14	186.97	118.96	294.64	18.93	202.90	272.28
39	ER9a	ExonRegion	0	1.47	5.94	0.14	11.94	25.90	1.60	2.35
40	E9a_E10a	KnownJunction	1	3.96	8.43	0.00	10.65	25.31	0.00	1.33
41	ER10a	ExonRegion	0	54.51	120.55	77.50	205.37	50.13	142.88	163.66
42	E10a_E11a	KnownJunction	0	88.59	102.56	108.74	231.66	74.81	167.28	283.82
43	E10a_E12a	KnownJunction	0	0.00	3.84	2.89	0.00	0.00	1.10	0.00
44	E10a_E13a	NovelJunction	0	2.59	8.25	5.98	20.02	0.00	10.24	10.16
45	ER11a	ExonRegion	0	58.50	100.30	81.90	198.59	51.42	126.15	216.38
46	E11a_E12a	KnownJunction	1	44.26	60.42	52.74	102.51	33.80	29.45	187.21
47	E11a_E13a	KnownJunction	0	24.67	61.63	33.61	128.20	10.56	110.44	92.51
48	ER12a	ExonRegion	1	29.38	88.93	48.84	131.33	34.40	55.21	210.86
49	E12a_E13a	KnownJunction	1	42.98	123.82	75.26	177.83	28.79	91.92	275.65
50	ER13a	ExonRegion	0	71.67	182.80	116.54	310.17	80.73	185.03	376.56
51	E13a_E14a	KnownJunction	0	42.26	105.35	68.10	160.46	102.40	94.82	210.41
52	E13a_E15a	KnownJunction	0	29.81	68.33	31.99	126.33	6.11	81.61	141.80
53	ER14a	ExonRegion	0	72.04	135.54	101.69	211.57	96.62	148.68	318.95
54	E14a_E15a	KnownJunction	0	75.94	162.59	120.85	237.45	67.22	150.88	346.16
55	ER15a	ExonRegion	0	131.31	248.04	207.96	456.79	103.68	279.56	550.43
56	E15_Da	KnownBoundary	0	64.26	81.91	98.65	186.47	56.23	133.76	218.68
57	E15a_E15b	KnownJunction	0	142.88	193.99	192.22	383.85	73.08	245.57	451.33
58	E15_Ab	KnownBoundary	0	73.42	122.90	110.28	211.45	69.85	138.34	234.53
59	ER15b	ExonRegion	0	191.34	277.39	264.63	527.47	157.11	332.65	606.68
60	ER15c	ExonRegion	0	204.22	284.68	268.53	506.21	143.09	321.12	604.32
61	E15b_E16a	KnownJunction	0	171.16	238.83	238.25	424.11	124.97	287.27	502.10
62	E15b_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	ER16a	ExonRegion	0	135.70	231.20	218.70	398.61	150.12	262.17	474.86
64	E16a_E17a	KnownJunction	0	78.49	122.21	126.11	222.12	92.51	147.18	318.13
65	E16a_E20a	KnownJunction	0	21.96	55.06	47.21	92.98	9.47	49.18	69.79
66	ER16b	ExonRegion	0	3.16	0.00	2.26	2.08	1.17	2.32	1.80
67	ER17a	ExonRegion	0	95.21	132.51	133.56	220.12	96.11	149.57	321.54
68	E17_Da	KnownBoundary	0	91.19	131.49	132.24	198.09	105.65	162.86	315.52
69	ER17b	ExonRegion	0	106.40	137.54	139.75	225.97	92.25	137.20	302.72
70	E17_Db	KnownBoundary	0	69.38	76.92	63.42	115.76	46.27	50.60	102.94
71	E17b_E20a	KnownJunction	1	18.46	40.64	48.37	103.57	29.37	55.82	145.64
72	ER17c	ExonRegion	0	88.72	80.94	113.02	85.38	44.33	59.40	116.27
73	E17_Dc	NovelBoundary	0	136.46	89.90	164.44	105.74	39.14	59.42	135.15
74	I17	Intron	0	95.02	93.63	104.95	91.96	50.71	50.78	125.24
75	I17_AR1	ActiveIntronRegion	0	95.22	93.82	105.16	92.15	50.82	50.88	125.51
76	ER18a	ExonRegion	0	0.00	0.00	0.08	0.00	0.00	0.00	0.00
77	I18	Intron	0	44.65	41.93	45.28	53.70	29.77	31.71	66.89
78	I18_AR1	ActiveIntronRegion	0	45.12	42.41	45.72	54.24	30.09	31.99	67.59
79	E19_Aa	NovelBoundary	0	99.17	75.06	106.18	96.53	60.72	66.87	126.63
80	ER19a	ExonRegion	0	12.61	4.75	10.58	4.90	16.12	2.47	9.95
81	E19_Da	NovelBoundary	0	69.86	70.88	71.64	71.41	30.38	43.31	95.23
82	E20_Aa	NovelBoundary	0	40.06	61.32	47.09	102.84	25.04	46.15	87.16
83	ER20a	ExonRegion	0	212.10	232.48	297.29	465.08	147.31	355.28	502.17
84	E20_Da	KnownBoundary	0	124.99	81.55	171.38	165.04	67.84	126.49	143.31
85	ER20b	ExonRegion	0	64.34	50.11	80.90	72.82	27.00	76.04	81.14
86	IG35	Intergenic	0	6.01	8.80	8.87	10.12	3.72	12.80	43.84
87	IG35_AR3	ActiveIntergenicRegion	0	2.14	2.85	2.46	3.19	0.52	4.08	9.93
88	IG35_AR2	ActiveIntergenicRegion	0	11.03	15.28	16.73	18.04	7.72	23.65	87.73