Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 KIAA1772 Gene 0 9.11 10.26 0.44 0.31 4.38 2.64 22.81 2 404449 Transcript 0 0.00 0.03 0.28 0.00 1.01 0.00 0.71 3 400483 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 269218 Transcript 0 5.68 7.88 0.31 0.30 3.32 2.84 23.37 5 ER1a ExonRegion 0 0.77 1.18 0.00 0.00 0.00 2.45 1.44 6 E1a_E2a KnownJunction 0 1.74 3.18 0.00 0.00 0.00 3.32 3.28 7 ER2a ExonRegion 0 4.69 8.54 0.44 0.00 1.72 4.06 14.40 8 E2a_E3a KnownJunction 0 8.63 12.08 1.24 0.00 0.85 5.57 12.83 9 ER3a ExonRegion 0 7.60 13.63 1.06 0.00 2.17 5.68 20.88 10 E3a_E4a KnownJunction 0 10.40 14.50 0.88 0.00 2.14 8.92 19.62 11 ER4a ExonRegion 0 11.63 13.98 0.68 0.00 6.27 4.36 26.38 12 E4a_E5a KnownJunction 0 14.04 8.67 0.00 0.00 4.36 1.21 30.28 13 ER5a ExonRegion 0 26.75 18.07 0.20 0.00 13.05 3.19 35.42 14 E5a_E6a KnownJunction 0 39.19 13.95 0.00 0.00 9.57 3.59 37.78 15 ER6a ExonRegion 0 20.96 13.10 0.90 0.00 8.39 2.45 29.70 16 E6a_E7a KnownJunction 0 18.01 15.37 1.32 0.00 3.25 4.02 30.77 17 ER7a ExonRegion 0 12.28 22.77 0.52 0.00 7.90 3.73 28.93 18 E7a_E8a KnownJunction 0 6.39 16.00 0.00 0.00 5.46 2.12 19.12 19 ER8a ExonRegion 0 13.68 18.41 0.00 0.00 8.23 5.28 37.88 20 E8a_E9a KnownJunction 0 9.05 12.40 0.00 0.00 5.81 7.08 26.26 21 ER9a ExonRegion 0 10.64 12.28 0.42 0.00 6.89 5.03 27.23 22 E9a_E10a KnownJunction 0 7.29 11.53 0.00 0.00 9.96 3.94 34.57 23 ER10a ExonRegion 0 11.58 8.59 0.37 0.69 6.28 1.46 20.22 24 E10a_E11a KnownJunction 0 12.42 6.73 0.00 0.00 6.34 1.21 16.60 25 ER11a ExonRegion 0 12.44 11.48 1.20 0.51 5.53 1.79 17.35 26 E11a_E12a KnownJunction 0 13.89 7.70 0.00 0.00 2.33 1.31 14.58 27 ER12a ExonRegion 0 10.65 8.47 0.42 1.08 5.36 0.36 17.21 28 E12a_E13a KnownJunction 0 8.46 4.91 0.00 1.44 6.41 1.02 19.98 29 ER13a ExonRegion 0 14.88 10.19 0.40 0.21 5.66 0.66 21.91 30 E13a_E14a KnownJunction 0 15.05 9.59 0.00 0.00 6.89 0.00 24.23 31 ER14a ExonRegion 0 14.63 8.79 0.00 0.00 5.72 3.09 25.68 32 E14a_E15a KnownJunction 0 15.76 4.44 0.00 0.00 8.32 1.66 27.73 33 ER15a ExonRegion 0 16.60 5.22 0.00 0.00 6.48 1.23 28.33 34 E15_Ac KnownBoundary 0 16.52 9.17 0.00 0.00 2.88 5.52 24.11 35 ER15b ExonRegion 0 15.46 7.76 0.00 0.00 4.42 4.34 25.17 36 ER15c ExonRegion 0 13.83 7.29 0.00 0.00 2.59 5.88 25.50 37 ER15d ExonRegion 0 8.38 8.24 0.19 0.00 2.82 2.30 14.89 38 E15_Db KnownBoundary 0 0.00 0.00 0.89 0.00 0.00 0.00 0.00 39 E15b_E17a KnownJunction 0 2.00 1.02 0.00 0.00 0.00 0.00 0.00 40 ER15e ExonRegion 0 0.00 0.03 0.28 0.00 1.01 0.00 0.71 41 ER16a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 I16_AR2 ActiveIntronRegion 0 6.58 7.54 0.85 1.05 3.36 0.50 17.74 43 ER17a ExonRegion 0 5.69 7.82 0.53 0.00 2.60 1.07 23.65 44 E17a_E18a KnownJunction 0 4.12 2.55 0.00 0.00 2.95 2.09 19.52 45 ER18a ExonRegion 0 5.29 6.37 1.14 0.00 2.38 3.31 25.42 46 E18a_E19a KnownJunction 0 5.36 11.09 0.00 0.00 2.03 0.00 21.15 47 ER19a ExonRegion 0 4.71 10.28 0.00 0.52 2.39 1.38 22.91 48 E19a_E20a KnownJunction 0 3.84 10.46 0.00 0.00 2.97 0.00 15.23 49 ER20a ExonRegion 0 6.00 7.75 0.91 0.51 4.17 2.02 21.62 50 E20a_E21a KnownJunction 0 2.50 6.41 0.56 1.68 1.15 1.63 23.32 51 ER21a ExonRegion 0 4.90 6.88 0.61 0.20 1.29 0.91 21.18 52 E21a_E22a KnownJunction 0 4.04 4.65 0.00 0.00 0.00 0.00 12.63 53 ER22a ExonRegion 0 3.64 8.73 0.09 0.49 1.26 0.50 12.11 54 E22a_E23a KnownJunction 0 1.90 5.02 0.00 0.00 0.00 2.41 10.76 55 ER23a ExonRegion 0 2.52 5.44 0.00 0.00 2.19 2.59 13.46 56 E23a_E24a KnownJunction 0 6.78 7.15 0.00 0.00 4.45 4.40 20.97 57 ER24a ExonRegion 0 7.64 9.72 0.00 0.00 3.56 5.62 32.39 58 E24a_E25a KnownJunction 0 5.12 5.18 0.00 0.00 8.02 1.66 31.97 59 ER25a ExonRegion 0 9.95 12.59 0.37 0.00 6.39 6.56 34.52 60 E25a_E26a KnownJunction 0 8.81 11.69 0.00 0.00 6.50 6.89 44.08 61 ER26a ExonRegion 0 12.02 14.38 1.05 1.03 6.43 8.27 44.51 62 E26a_E27a KnownJunction 0 11.28 10.67 0.79 1.33 7.88 8.09 35.73 63 ER27a ExonRegion 0 6.93 7.59 0.69 0.78 4.38 3.13 27.05 64 IG3 Intergenic 0 6.20 2.88 0.85 0.55 3.40 1.79 7.96 65 IG3_AR6 ActiveIntergenicRegion 0 9.23 10.93 0.75 0.60 5.77 2.81 26.00 66 IG3_AR7 ActiveIntergenicRegion 0 14.14 12.20 1.52 2.07 10.85 6.45 32.92 67 IG3_AR8 ActiveIntergenicRegion 0 8.90 7.35 0.86 1.02 7.87 3.28 19.31 68 IG3_AR9 ActiveIntergenicRegion 0 7.46 5.43 0.87 0.24 4.92 3.68 18.16 69 IG3_AR10 ActiveIntergenicRegion 0 5.15 3.63 0.25 0.32 3.38 2.49 9.41 70 IG3_AR11 ActiveIntergenicRegion 0 11.92 5.95 0.59 0.55 3.62 0.98 15.64 71 IG3_SR8 SilentIntergenicRegion 0 15.55 7.86 1.78 0.64 7.46 2.54 21.85 72 IG3_AR12 ActiveIntergenicRegion 0 16.09 7.36 0.48 1.25 6.43 3.82 29.44 73 IG3_AR13 ActiveIntergenicRegion 0 15.46 6.93 0.96 0.85 7.93 5.06 18.84